Add test requirements #938
Workflow file for this run
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| name: TileDB Python CI - With Earliest Supported Version of NumPy | ||
| on: | ||
| workflow_call: | ||
| inputs: | ||
| libtiledb_version: | ||
| required: true | ||
| type: string | ||
| jobs: | ||
| test: | ||
| runs-on: ${{ matrix.os }} | ||
| defaults: | ||
| run: | ||
| shell: bash | ||
| strategy: | ||
| matrix: | ||
| os: [ubuntu-latest, macos-12, windows-latest] | ||
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | ||
| include: | ||
| # https://github.com/scipy/oldest-supported-numpy/blob/main/setup.cfg | ||
| - python-version: "3.12" | ||
| numpy-version: "1.26.4" | ||
| - python-version: "3.11" | ||
| numpy-version: "1.23.2" | ||
| - python-version: "3.10" | ||
| numpy-version: "1.21.6" | ||
| - python-version: "3.9" | ||
| numpy-version: "1.19.3" | ||
| - python-version: "3.8" | ||
| numpy-version: "1.17.3" | ||
| fail-fast: false | ||
| env: | ||
| TILEDB_VERSION: ${{ github.event.inputs.libtiledb_version }} | ||
| # 11.7 necessary due to: https://github.com/actions/setup-python/issues/682#issuecomment-1604261330 | ||
| #MACOSX_DEPLOYMENT_TARGET: "10.15" | ||
| MACOSX_DEPLOYMENT_TARGET: ${{ matrix.os == 'macos-12' && matrix.python-version == '3.8' ? '11.7' : '11' }} | ||
| VCPKG_BINARY_SOURCES: 'clear;x-gha,readwrite' | ||
| steps: | ||
| - name: Checkout TileDB-Py `dev` | ||
| uses: actions/checkout@v3 | ||
| # By default Visual Studio chooses the earliest installed toolset version | ||
| # for the main build and vcpkg chooses the latest. Force it to use the | ||
| # latest (14.39 currently). | ||
| - name: Setup MSVC toolset (VS 2022) | ||
| uses: TheMrMilchmann/setup-msvc-dev@v3 | ||
| if: matrix.os == 'windows-latest' | ||
| with: | ||
| arch: x64 | ||
| toolset: 14.39 | ||
| - name: Install Ninja (VS 2022) | ||
| uses: seanmiddleditch/gha-setup-ninja@v4 | ||
| if: matrix.os == 'windows-latest' | ||
| - name: Enable vcpkg binary caching | ||
| uses: actions/github-script@v6 | ||
| with: | ||
| script: | | ||
| core.exportVariable('ACTIONS_CACHE_URL', process.env.ACTIONS_CACHE_URL || ''); | ||
| core.exportVariable('ACTIONS_RUNTIME_TOKEN', process.env.ACTIONS_RUNTIME_TOKEN || ''); | ||
| - name: "Set CMAKE_GENERATOR" | ||
| run: export CMAKE_GENERATOR="Ninja" | ||
| if: matrix.os == 'windows-latest' | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Print Python version | ||
| run: | | ||
| which python | ||
| which pip | ||
| python --version | ||
| - name: Print env | ||
| run: printenv | ||
| - name: Use Oldest Version of NumPy | ||
| run: python -m pip install numpy==${{ matrix.numpy-version }} | ||
| - name: Checkout TileDB-Py `dev` | ||
| uses: actions/checkout@v3 | ||
| - name: Install dependencies | ||
| run: python -m pip install --upgrade -r misc/requirements_ci.txt | ||
| - name: Test without pandas | ||
| run: python -m pip uninstall -y pandas | ||
| - name: Build TileDB-Py | ||
| run: | | ||
| echo "CMAKE_GENERATOR=$CMAKE_GENERATOR" | ||
| python setup.py build_ext --inplace --werror | ||
| python setup.py develop | ||
| - name: Test TileDB-Py | ||
| run: pytest -vv | ||
| create_issue_on_fail: | ||
| permissions: | ||
| issues: write | ||
| runs-on: ubuntu-latest | ||
| needs: test | ||
| if: failure() || cancelled() | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| - name: Create Issue if Build Fails | ||
| uses: TileDB-Inc/github-actions/open-issue@main | ||
| with: | ||
| name: nightly build with earliest supported numpy | ||
| label: bug,nightly-failure | ||
| assignee: kounelisagis,nguyenv,KiterLuc,ihnorton | ||
