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Python Repository for the simulation of example SMLM gifs, videos and tiffs from input images

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TheLeeLab/pySMLM_Simulator

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Installation Instructions

The package "pySMLM_Simulator" is a set of python classes that can be run from scripts, interactive notebooks and so on to simulate single molecule localisation microscopy data. This does so on an input image that is converted to pointllistic representation. An example notebook is provided, showing example uses. The code has been tested in Python 3.10.12.

A list of package requirements are noted in the "requirements.txt" file. These can be installed using the command:

pip install -r requirements.txt

Contributing

Patches and contributions are very welcome! Please see CONTRIBUTING.md and the CODE_OF_CONDUCT.md for more details.

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Python Repository for the simulation of example SMLM gifs, videos and tiffs from input images

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