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User-friendly interface for annotation of MRI DICOM files and the calculation of centerlines

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TechnionComputationalMRILab/ImageUntangler

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ImageUntangler

Project to aid Gastroenterologists and biologists to analyze MRI images of the Small Bowel. The main benefit the project hopes to add is MPR for Small Bowel MRI images

Currently under development in TCML under Professor Moti Freiman.
Current Developers: Avraham Kahan, Angeleene Ang.
Project Founder: Yael Zaffrani

Installation

Run the MainWindow.exe from the release section

Updating

Overwrite the contents of the zip from the previous release

Build

See requirements.txt for dependencies.

Run main.py in the root folder

To compile with PyInstaller, use the MainWindow.spec file for a one-folder install

Screenshot

screenshot

screenshot

Roadmap

See the project board

Usage / Shortcuts

Mouse

Display Panel Centerline Panel
Left click Point picking (if activated) Point picking (if activated)
Left click drag Change level/window (if point picking is not active) Change level/window (if point picking is not active)
Mousewheel Change slice index Change angle
Right click drag Zoom Zoom

Keyboard shortcuts

c - Disable cursor

Debug shortcuts

On main screen: Ctrl+q - open folder using File Dialog

With an opened case: Ctrl+d - show coordinates of all points in a dialog box Ctrl+p - import points from version 3 of ImageUntangler