chore: version 8.3.4

SysBioChalmers · Jul 28, 2019 · bf49eaa · bf49eaa
1 parent 8d595ac
commit bf49eaa
Show file tree

Hide file tree

Showing 5 changed files with 10 additions and 2 deletions.
diff --git a/ModelFiles/mat/yeastGEM.mat b/ModelFiles/mat/yeastGEM.mat
diff --git a/ModelFiles/xlsx/yeastGEM.xlsx b/ModelFiles/xlsx/yeastGEM.xlsx
diff --git a/ModelFiles/xml/yeastGEM.xml b/ModelFiles/xml/yeastGEM.xml
@@ -1,6 +1,6 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1" level="3" version="1" fbc:required="false" groups:required="false">
-  <model metaid="yeastGEM.xml" id="M_yeastGEM_v8__46__3__46__3" name="The Consensus Genome-Scale Metabolic Model of Yeast" fbc:strict="true">
+  <model metaid="yeastGEM.xml" id="M_yeastGEM_v8__46__3__46__4" name="The Consensus Genome-Scale Metabolic Model of Yeast" fbc:strict="true">
     <listOfUnitDefinitions>
       <unitDefinition id="mmol_per_gDW_per_hr">
         <listOfUnits>

diff --git a/history.md b/history.md
@@ -1,5 +1,13 @@
 # History
 
+### yeast 8.3.4:
+* Features:
+  * Fixes #171: Added 101 GPR rules to transport rxns according to TCDB database (PR #178).
+  * Added 18 met formulas from manual search (PR #155).
+  * Performed gap-filling for connecting 29 dead-end mets, by adding 28 transport rxns (PR #185). Added documentation to the gap-filling functions in PR #195.
+* Fixes:
+  * Corrected typo in gene ID (PR #186).
+
 ### yeast 8.3.3:
 * Features:
   * Fixes #107: Two new pseudoreactions (`cofactor pseudoreaction` and `ion pseudoreaction`) added to the model as extra requirements to the biomass pseudoreaction (PRs #174 & #183).

diff --git a/version.txt b/version.txt
@@ -1 +1 @@
-8.3.3
+8.3.4