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Merge pull request #250 from SysBioChalmers/devel
yeast 8.4.2
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| Systematic_name Standard_name | ||
| YPL095C EEB1 | ||
| YBR177C EHT1 | ||
| YGR015C EAT1 |
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| rxnID coefficient metabolite standard name Metabolite_type component | ||
| r_4629 1 hexanoyl-CoA reactant mitochondrion | ||
| r_4629 1 ethanol reactant mitochondrion | ||
| r_4629 1 ethyl hexanoate product mitochondrion | ||
| r_4629 1 coenzyme A product mitochondrion | ||
| r_4630 1 octanoyl-CoA reactant mitochondrion | ||
| r_4630 1 ethanol reactant mitochondrion | ||
| r_4630 1 ethyl octanoate product mitochondrion | ||
| r_4630 1 coenzyme A product mitochondrion | ||
| r_4631 1 butanoyl-CoA reactant mitochondrion | ||
| r_4631 1 ethanol reactant mitochondrion | ||
| r_4631 1 ethyl butanoate product mitochondrion | ||
| r_4631 1 coenzyme A product mitochondrion | ||
| r_4632 1 acetyl-CoA reactant mitochondrion | ||
| r_4632 1 hexanol reactant mitochondrion | ||
| r_4632 1 hexyl acetate product mitochondrion | ||
| r_4632 1 coenzyme A product mitochondrion | ||
| r_4633 1 decanoyl-CoA reactant mitochondrion | ||
| r_4633 1 ethanol reactant mitochondrion | ||
| r_4633 1 ethyl decanoate product mitochondrion | ||
| r_4633 1 coenzyme A product mitochondrion | ||
| r_4634 1 ethyl hexanoate reactant mitochondrion | ||
| r_4634 1 ethyl hexanoate product cytoplasm | ||
| r_4635 1 ethyl octanoate reactant mitochondrion | ||
| r_4635 1 ethyl octanoate product cytoplasm | ||
| r_4636 1 ethyl butanoate reactant mitochondrion | ||
| r_4636 1 ethyl butanoate product cytoplasm | ||
| r_4637 1 hexyl acetate reactant mitochondrion | ||
| r_4637 1 hexyl acetate product cytoplasm | ||
| r_4638 1 ethyl decanoate reactant mitochondrion | ||
| r_4638 1 ethyl decanoate product cytoplasm | ||
| r_4639 1 ethyl hexanoate reactant cytoplasm | ||
| r_4639 1 ethyl hexanoate product extracellular | ||
| r_4640 1 ethyl octanoate reactant cytoplasm | ||
| r_4640 1 ethyl octanoate product extracellular | ||
| r_4641 1 ethyl butanoate reactant cytoplasm | ||
| r_4641 1 ethyl butanoate product extracellular | ||
| r_4642 1 hexyl acetate reactant cytoplasm | ||
| r_4642 1 hexyl acetate product extracellular | ||
| r_4643 1 ethyl decanoate reactant cytoplasm | ||
| r_4643 1 ethyl decanoate product extracellular | ||
| r_4644 1 ethyl hexanoate reactant extracellular | ||
| r_4645 1 ethyl octanoate reactant extracellular | ||
| r_4646 1 ethyl butanoate reactant extracellular | ||
| r_4647 1 hexyl acetate reactant extracellular | ||
| r_4648 1 ethyl decanoate reactant extracellular | ||
| r_4649 1 ethanol reactant mitochondrion | ||
| r_4649 1 acetyl-CoA reactant mitochondrion | ||
| r_4649 1 ethyl acetate product mitochondrion | ||
| r_4649 1 coenzyme A product mitochondrion | ||
| r_4650 1 ethyl acetate reactant mitochondrion | ||
| r_4650 1 ethyl acetate product cytoplasm | ||
| r_4651 1 H+ reactant cytoplasm | ||
| r_4651 1 2-oxobutanoate reactant cytoplasm | ||
| r_4651 1 carbon dioxide product cytoplasm | ||
| r_4651 1 propanal product cytoplasm | ||
| r_4652 1 propanal reactant cytoplasm | ||
| r_4652 1 H+ reactant cytoplasm | ||
| r_4652 1 NADH reactant cytoplasm | ||
| r_4652 1 propanol product cytoplasm | ||
| r_4652 1 NAD product cytoplasm | ||
| r_4653 1 propanal reactant mitochondrion | ||
| r_4653 1 H+ reactant mitochondrion | ||
| r_4653 1 NADH reactant mitochondrion | ||
| r_4653 1 propanol product mitochondrion | ||
| r_4653 1 NAD product mitochondrion | ||
| r_4654 1 propanal reactant cytoplasm | ||
| r_4654 1 H+ reactant cytoplasm | ||
| r_4654 1 NADPH reactant cytoplasm | ||
| r_4654 1 propanol product cytoplasm | ||
| r_4654 1 NADP(+) product cytoplasm | ||
| r_4655 1 propanol reactant mitochondrion | ||
| r_4655 1 propanol product cytoplasm | ||
| r_4656 1 propanal reactant cytoplasm | ||
| r_4656 1 propanal product extracellular | ||
| r_4657 1 propanol reactant cytoplasm | ||
| r_4657 1 propanol product extracellular | ||
| r_4658 1 propanal reactant extracellular | ||
| r_4659 1 propanol reactant extracellular | ||
| r_4660 1 H+ reactant cytoplasm | ||
| r_4660 1 4-methylthio-2-oxobutanoate reactant cytoplasm | ||
| r_4660 1 carbon dioxide product cytoplasm | ||
| r_4660 1 methional product cytoplasm | ||
| r_4661 1 methional reactant cytoplasm | ||
| r_4661 1 H+ reactant cytoplasm | ||
| r_4661 1 NADH reactant cytoplasm | ||
| r_4661 1 methionol product cytoplasm | ||
| r_4661 1 NAD product cytoplasm | ||
| r_4662 1 methional reactant mitochondrion | ||
| r_4662 1 H+ reactant mitochondrion | ||
| r_4662 1 NADH reactant mitochondrion | ||
| r_4662 1 methionol product mitochondrion | ||
| r_4662 1 NAD product mitochondrion | ||
| r_4663 1 methional reactant cytoplasm | ||
| r_4663 1 H+ reactant cytoplasm | ||
| r_4663 1 NADPH reactant cytoplasm | ||
| r_4663 1 methionol product cytoplasm | ||
| r_4663 1 NADP(+) product cytoplasm | ||
| r_4664 1 methionol reactant mitochondrion | ||
| r_4664 1 methionol product cytoplasm | ||
| r_4665 1 methional reactant cytoplasm | ||
| r_4665 1 methional product extracellular | ||
| r_4666 1 methionol reactant cytoplasm | ||
| r_4666 1 methionol product extracellular | ||
| r_4667 1 methional reactant extracellular | ||
| r_4668 1 methionol reactant extracellular | ||
| r_4669 1 H+ reactant cytoplasm | ||
| r_4669 1 3-(4-hydroxyphenyl)pyruvate reactant cytoplasm | ||
| r_4669 1 carbon dioxide product cytoplasm | ||
| r_4669 1 (4-hydroxyphenyl)acetaldehyde product cytoplasm | ||
| r_4670 1 (4-hydroxyphenyl)acetaldehyde reactant cytoplasm | ||
| r_4670 1 H+ reactant cytoplasm | ||
| r_4670 1 NADH reactant cytoplasm | ||
| r_4670 1 tyrosol product cytoplasm | ||
| r_4670 1 NAD product cytoplasm | ||
| r_4671 1 (4-hydroxyphenyl)acetaldehyde reactant mitochondrion | ||
| r_4671 1 H+ reactant mitochondrion | ||
| r_4671 1 NADH reactant mitochondrion | ||
| r_4671 1 tyrosol product mitochondrion | ||
| r_4671 1 NAD product mitochondrion | ||
| r_4672 1 (4-hydroxyphenyl)acetaldehyde reactant cytoplasm | ||
| r_4672 1 H+ reactant cytoplasm | ||
| r_4672 1 NADPH reactant cytoplasm | ||
| r_4672 1 tyrosol product cytoplasm | ||
| r_4672 1 NADP(+) product cytoplasm | ||
| r_4673 1 tyrosol reactant mitochondrion | ||
| r_4673 1 tyrosol product cytoplasm | ||
| r_4674 1 (4-hydroxyphenyl)acetaldehyde reactant cytoplasm | ||
| r_4674 1 (4-hydroxyphenyl)acetaldehyde product extracellular | ||
| r_4675 1 tyrosol reactant cytoplasm | ||
| r_4675 1 tyrosol product extracellular | ||
| r_4676 1 (4-hydroxyphenyl)acetaldehyde reactant extracellular | ||
| r_4677 1 tyrosol reactant extracellular | ||
| r_4678 1 propanal reactant cytoplasm | ||
| r_4678 1 NAD reactant cytoplasm | ||
| r_4678 1 H2O reactant cytoplasm | ||
| r_4678 1 propionate product cytoplasm | ||
| r_4678 1 H+ product cytoplasm | ||
| r_4678 1 NADH product cytoplasm | ||
| r_4679 1 ATP reactant peroxisome | ||
| r_4679 1 coenzyme A reactant peroxisome | ||
| r_4679 1 propionate reactant peroxisome | ||
| r_4679 1 AMP product peroxisome | ||
| r_4679 1 propionyl-CoA product peroxisome | ||
| r_4679 1 diphosphate product peroxisome | ||
| r_4680 1 propionyl-CoA reactant mitochondrion | ||
| r_4680 1 ethanol reactant mitochondrion | ||
| r_4680 1 ethyl propionate product mitochondrion | ||
| r_4680 1 coenzyme A product mitochondrion | ||
| r_4681 1 propionyl-CoA reactant peroxisome | ||
| r_4681 1 propionyl-CoA product mitochondrion | ||
| r_4682 1 butanoyl-CoA reactant peroxisome | ||
| r_4682 1 butanoyl-CoA product mitochondrion | ||
| r_4683 1 hexanoyl-CoA reactant peroxisome | ||
| r_4683 1 hexanoyl-CoA product mitochondrion | ||
| r_4684 1 octanoyl-CoA reactant peroxisome | ||
| r_4684 1 octanoyl-CoA product mitochondrion | ||
| r_4685 1 decanoyl-CoA reactant peroxisome | ||
| r_4685 1 decanoyl-CoA product mitochondrion | ||
| r_4686 1 propionate reactant peroxisome | ||
| r_4686 1 propionate product cytoplasm | ||
| r_4687 1 acetyl-CoA reactant cytoplasm | ||
| r_4687 1 tyrosol reactant cytoplasm | ||
| r_4687 1 coenzyme A product cytoplasm | ||
| r_4687 1 tyrosyl acetate product cytoplasm | ||
| r_4688 1 tyrosyl acetate reactant cytoplasm | ||
| r_4688 1 tyrosyl acetate product extracellular | ||
| r_4689 1 tyrosyl acetate reactant extracellular | ||
| r_4690 1 acetyl-CoA reactant cytoplasm | ||
| r_4690 1 methionol reactant cytoplasm | ||
| r_4690 1 coenzyme A product cytoplasm | ||
| r_4690 1 methionyl acetate product cytoplasm | ||
| r_4691 1 methionyl acetate reactant cytoplasm | ||
| r_4691 1 methionyl acetate product extracellular | ||
| r_4692 1 methionyl acetate reactant extracellular | ||
| r_4693 1 acetyl-CoA reactant cytoplasm | ||
| r_4693 1 propanol reactant cytoplasm | ||
| r_4693 1 coenzyme A product cytoplasm | ||
| r_4693 1 propyl acetate product cytoplasm | ||
| r_4694 1 propyl acetate reactant cytoplasm | ||
| r_4694 1 propyl acetate product extracellular | ||
| r_4695 1 propyl acetate reactant extracellular | ||
| r_4697 1 ethyl propionate reactant mitochondrion | ||
| r_4697 1 ethyl propionate product cytoplasm | ||
| r_4698 1 ethyl propionate reactant cytoplasm | ||
| r_4698 1 ethyl propionate product extracellular | ||
| r_4699 1 ethyl propionate reactant extracellular |
25 changes: 25 additions & 0 deletions
25
ComplementaryData/modelCuration/FAEnewRxnMetAnnotation.tsv
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| NewMetName Charged formula Charge KEGG ID CHEBI ID | ||
| ethyl hexanoate C8H16O2 0 CHEBI:86055 | ||
| octanoyl-CoA C29H46N7O17P3S -4 C01944 CHEBI:15533 | ||
| ethyl octanoate C10H20O2 0 C12292 CHEBI:87426 | ||
| butanoyl-CoA C25H38N7O17P3S -4 C00136 CHEBI:57371 | ||
| ethyl butanoate C6H12O2 0 CHEBI:88764 | ||
| hexanol C6H14O 0 CHEBI:87393 | ||
| hexyl acetate C8H16O2 0 CHEBI:87510 | ||
| decanoyl-CoA C31H50N7O17P3S -4 C05274 CHEBI:61430 | ||
| ethyl decanoate C12H24O2 0 CHEBI:87430 | ||
| ethyl acetate C4H8O2 0 C00849 CHEBI:27750 | ||
| propanal C3H6O 0 C00479 CHEBI:17153 | ||
| propanol C3H8O 0 C05979 CHEBI:28831 | ||
| methional C4H8OS 0 CHEBI:49017 | ||
| methionol C4H10OS 0 CHEBI:49019 | ||
| (4-hydroxyphenyl)acetaldehyde C8H8O2 0 CHEBI:15621 | ||
| tyrosol C8H10O2 0 C06044 CHEBI:1879 | ||
| propionate C3H6O2 0 C00163 CHEBI:30768 | ||
| propionyl-CoA C24H36N7O17P3S -4 C00100 CHEBI:57386 | ||
| ethyl propionate C5H10O2 0 CHEBI:41330 | ||
| tyrosyl acetate C10H12O3 0 | ||
| methionyl acetate C6H12O2S 0 | ||
| propyl acetate C5H10O2 0 CHEBI:40116 | ||
| ethylene C2H4 0 C06547 CHEBI:18153 | ||
| dimethyl disulfide C2H6S2 0 CHEBI:4608 |
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| RxnID REV GPR RxnName EC Subsystems RxnKEGGid | ||
| r_4629 1 (YBR177C or YPL095C) alcohol acyltransferase (hexanoyl-CoA) 2.3.1.84 R00627 | ||
| r_4630 1 (YBR177C or YPL095C) alcohol acyltransferase (octanoyl-CoA) 2.3.1.84 R00627 | ||
| r_4631 1 (YBR177C or YPL095C) alcohol acyltransferase (butyryl-CoA) 2.3.1.84 R00627 | ||
| r_4632 1 (YGR177C or YOR377W or YGR015C) alcohol acetyltransferase (hexanol) 2.3.1.84 R00627 | ||
| r_4633 1 (YBR177C or YPL095C) alcohol acyltransferase (decanoyl-CoA) 2.3.1.84 R00627 | ||
| r_4634 1 ethyl hexanoate transport, mitochondrial | ||
| r_4635 1 ethyl octanoate transport, mitochondrial | ||
| r_4636 1 ethyl butanoate transport, mitochondrial | ||
| r_4637 0 hexyl acetate transport, mitochondrial | ||
| r_4638 0 ethyl decanoate transport, mitochondrial | ||
| r_4639 1 ethyl hexanoate transport | ||
| r_4640 1 ethyl octanoate transport | ||
| r_4641 1 ethyl butanoate transport | ||
| r_4642 0 hexyl acetate transport | ||
| r_4643 0 ethyl decanoate transport | ||
| r_4644 0 ethyl hexanoate exchange | ||
| r_4645 0 ethyl octanoate exchange | ||
| r_4646 0 ethyl butanoate exchange | ||
| r_4647 0 hexyl acetate exchange | ||
| r_4648 0 ethyl decanoate exchange | ||
| r_4649 0 (YGR015C) mitochondrial ethanol O-acetyltransferase 2.3.1.268 R11957 | ||
| r_4650 0 ethyl acetate transport, mitochondrial | ||
| r_4651 0 (YGR087C or YLR044C or YLR134W) pyruvate decarboxylase (aldedyde-forming) 4.1.1.1 R00636 | ||
| r_4652 0 (YBR145W or YDL168W or YOL086C) aldehyde dehydrogenase (1-propanol, NAD) 1.1.1.-; 1.1.1.1; 1.1.1.284 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics R00754 | ||
| r_4653 0 (YGL256W or YMR083W) aldehyde dehydrogenase (1-propanol, NAD) 1.1.1.1 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4654 0 (YCR105W or YDR368W or YMR318C) aldehyde dehydrogenase (1-propanol, NADP) 1.1.1.-; 1.1.1.2 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4655 1 1-propyl alcohol transport, mitochondrial | ||
| r_4656 1 propanal transport, cytosol | ||
| r_4657 1 1-propyl alcohol transport, cytosol | ||
| r_4658 0 propanal exchange | ||
| r_4659 0 propanol exchange | ||
| r_4660 1 (YHR137W) 2-oxo acid decarboxylase 4.1.1.1 R00636 | ||
| r_4661 0 (YBR145W or YDL168W or YOL086C) aldehyde dehydrogenase (methionol, NAD) 1.1.1.-; 1.1.1.1; 1.1.1.284 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics R00754 | ||
| r_4662 0 (YGL256W or YMR083W) aldehyde dehydrogenase (methionol, NAD) 1.1.1.1 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4663 0 (YCR105W or YDR368W or YMR318C) aldehyde dehydrogenase (methionol, NADP) 1.1.1.-; 1.1.1.2 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4664 1 methionol transport, mitochondrial | ||
| r_4665 1 methional transport, cytosol | ||
| r_4666 1 methionol transport, cytosol | ||
| r_4667 0 methional exchange | ||
| r_4668 0 methionol exchange | ||
| r_4669 0 (YGR087C or YLR044C or YLR134W) pyruvate decarboxylase (hydroxy-phenyl) 4.1.1.1 | ||
| r_4670 0 (YBR145W or YDL168W or YOL086C) aldehyde dehydrogenase (tyrosol, NAD) 1.1.1.-; 1.1.1.1; 1.1.1.284 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4671 0 (YGL256W or YMR083W) aldehyde dehydrogenase (tyrosol, NAD) 1.1.1.1 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4672 0 (YCR105W or YDR368W or YMR318C) aldehyde dehydrogenase (tyrosol, NADP) 1.1.1.-; 1.1.1.2 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4673 1 tyrosol transport, mitochondrial | ||
| r_4674 1 (4-hydroxyphenyl)acetaldehyde transport, cytosol | ||
| r_4675 1 tyrosol transport, cytosol | ||
| r_4676 0 (4-hydroxyphenyl)acetaldehyde exchange | ||
| r_4677 0 tyrosol exchange | ||
| r_4678 1 (YMR170C or YMR169C or YOR374W) aldehyde dehydrogenase 1.2.1.5 Gluconeogenesis;sce00010 Glycolysis;sce00071 Fatty acid degradation;sce00350 Tyrosine metabolism;sce01110 Biosynthesis of secondary metabolites;sce01130 Biosynthesis of antibiotics | ||
| r_4679 1 (YOR317W or YER015W or YIL009W or YMR246W) short-chain-fatty-acid-CoA ligase (propionate) 6.2.1.3 sce00061 Fatty acid biosynthesis;sce00071 Fatty acid degradation;sce01212 Fatty acid metabolism;sce04146 Peroxisome | ||
| r_4680 1 (YBR177C or YPL095C) alcohol acyltransferase (propionyl-CoA) 2.3.1.84 | ||
| r_4681 1 propionyl-CoA transport, mitochondrial | ||
| r_4682 1 butyryl-CoA transport, mitochondrial | ||
| r_4683 1 hexanoyl-CoA transport, mitochondrial | ||
| r_4684 1 octanoyl-CoA transport, mitochondrial | ||
| r_4685 1 decanoyl-CoA transport, mitochondrial | ||
| r_4686 1 propionate transport, cytosol | ||
| r_4687 0 (YGR177C or YOR377W or YGR015C) alcohol acetyltransferase (tyrosol) 2.3.1.84 | ||
| r_4688 0 tyrosyl acetate transport | ||
| r_4689 0 tyrosyl acetate exchange | ||
| r_4690 0 (YGR177C or YOR377W or YGR015C) alcohol acetyltransferase (methionol) 2.3.1.84 | ||
| r_4691 0 methionyl acetate transport | ||
| r_4692 0 methionyl acetate exchange | ||
| r_4693 0 (YGR177C or YOR377W or YGR015C) alcohol acetyltransferase (propanol) 2.3.1.84 | ||
| r_4694 0 propyl acetate transport | ||
| r_4695 0 propyl acetate exchange | ||
| r_4697 1 ethyl propionate transport, mitochondrial | ||
| r_4698 0 ethyl propionate transport | ||
| r_4699 0 ethyl propionate exchange |
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