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human v1.0.1 #97
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human v1.0.1 #97
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Starting with an exact copy of RAVEN's writeYaml function.
- All "names:" entries are now enclosed in double quotes. - Subsystems have been converted to lists, even when they contain one value. - All "annotation:" fields are now excluded from the yaml.
Much of the metadata is currently hard-coded, but this can be updated with future model iterations.
- Instead of manually coding the necessary metadata, now arrange these info into the existing fields in RAVEN and extract out accordingly by this refactoring.
- Change filename from issue71 to addMetaData
Additional changes with consensus are added here: - Reformat EC-number in eccodes field - Remove rxnComps field - Turn `version` into a blank field - Initialize rxnConfidenceScores field with zero
feat: add metadata and miscellaneous adjustments
This update is implemented by running script `miscModelCurationScript_20190323.m`: - metadata is incoporated both in mat and yaml files according to #71 - reformat EC-number in `eccodes` field, as discussed in #93 - remove `rxnComps` field, according to #184 in RAVEN - empty `version` field to enable a simple and clear work flow - initialize `rxnConfidenceScores` field with zero, as discussed in #48
- Adapt from RAVEN function exportForGit
feat: enable automatic human-GEM release
JonathanRob
approved these changes
Apr 3, 2019
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Main improvements in this PR:
Yaml
format file by new functionwriteHumanYaml
miscModelCurationScript_20190323
exportHumanGEM
and adjustincreaseHumanGEMVersion
for enabling automatic model releaseI hereby confirm that I have:
devel
as a target branch