chore: bump workflow dependency version

[mihai-sysbio]

Main improvements in this PR:

This PR aims to update the dependencies of GH workflows.

I hereby confirm that I have:

• Tested my code on my own computer for running the model
• Selected develop as a target branch
• Any removed reactions and metabolites have been moved to the corresponding deprecated identifier lists

[mihai-sysbio]

Note: this PR should stay as draft until the yaml-validation passes. The current version seems to have problems that are out of our control.

[mihai-sysbio]

The problem seems to originate in the yaml-validation action, and there is a pending PR for it ibiqlik/action-yamllint#38.

[haowang-bioinfo]

it's okay to step away from ibiqlik, which apears to be very slow

[mihai-sysbio]

Thanks for the review @haowang-bioinfo, I've merged this PR.

Indeed, it seemed that there was very little activity in the original repository, which is why I've forked that repository and published that a new GH Action which is used in this PR.

[haowang-bioinfo]

Indeed, it seemed that there was very little activity in the original repository, which is why I've forked that repository and published that a new GH Action which is used in this PR.

probably consider centralizing all used GH actions for convenient maintenance