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@cjmyers cjmyers released this 16 May 05:46
· 485 commits to master since this release
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SynBioHub is a design repository for people designing biological constructs. It enables DNA and protein designs to be uploaded and shared. SynBioHub also facilitates searching for information about existing useful parts and designs by combining data from a variety of sources. Finally, it has a programmatic interface that allows applications to connect to SynBioHub via a RESTful API to enable third-party software to search, fetch, and submit parts and other design information.

The easiest install method is using Docker, instructions here:

http://wiki.synbiohub.org/wiki/Installation

It is also possible to run on Mac and Linux systems without using Docker. Instructions can be found on the repository README here:

https://github.com/SynBioHub/synbiohub

If you have an instance of SynBioHub running on your machine and would like to make it publicly accessible using the web, we recommend using nginx. Instructions for deploying on nginx can be found here:

http://wiki.synbiohub.org/wiki/NGINX_configuration_instructions

Finally, if you do create a publically accessible instance of SynBioHub, we would like to hear from you, so we may add it to our web-of-registries. Please email:

[email protected]

New Features

  • Support for sequence-based search
  • Additional improvements to the programmatic API support
  • Finer grain types on the collection pages and support to filter by these types
  • Ability to add and remove members of collections

Changes

  • Updated API error messages
  • Change to use sbols.org for SBOL terms

Bug fixes

  • Fixed several unhandled promise exceptions
  • Fixed bug with logo lost on docker restarts
  • Fixed bug that caused crash when attachURL has not type selected
  • Fixed several bugs in the add/edit/remove fields functionality