fixed an error when using Matrix_ID_mapping special in 1.6.4

Starlitnightly · Jul 17, 2024 · d17295e · d17295e
1 parent ac76a0a
commit d17295e
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/omicverse/bulk/_Deseq2.py b/omicverse/bulk/_Deseq2.py
@@ -29,7 +29,7 @@ def Matrix_ID_mapping(data:pd.DataFrame,gene_ref_path:str)->pd.DataFrame:
     pair=pd.read_csv(gene_ref_path,sep='\t',index_col=0)
     ret_gene=list(set(data.index.tolist()) & set(pair.index.tolist()))
     data=data.loc[ret_gene]
-    data=data_drop_duplicates_index(data)
+    #data=data_drop_duplicates_index(data)
     new_index=[]
     for i in ret_gene:
         a=pair.loc[i,'symbol']

diff --git a/omicverse/bulk/_Enrichment.py b/omicverse/bulk/_Enrichment.py
@@ -297,7 +297,7 @@ def geneset_plot_multi(enr_dict,colors_dict,num:int=5,fontsize=10,
     for key in enr_dict.keys():
         enr_dict[key]['Type']=key
     enr_all=pd.concat([enr_dict[i].iloc[:num] for i in enr_dict.keys()],axis=0)
-    enr_all['Term']=[ov.utils.plot_text_set(i.split('(')[0],text_knock=text_knock,text_maxsize=text_maxsize) for i in enr_all.Term.tolist()]
+    enr_all['Term']=[plot_text_set(i.split('(')[0],text_knock=text_knock,text_maxsize=text_maxsize) for i in enr_all.Term.tolist()]
     enr_all.index=enr_all.Term
     enr_all['Term1']=[i for i in enr_all.index.tolist()]
     del enr_all['Term']

diff --git a/pyproject.toml b/pyproject.toml
@@ -6,7 +6,7 @@ build-backend = "flit_core.buildapi"
 
 [project]
 name = "omicverse"
-version = "1.6.4"
+version = "1.6.5"
 description = "OmicVerse: A single pipeline for exploring the entire transcriptome universe"
 readme = "README.md"
 requires-python = ">=3.8"