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Update t_nocd_annotated.py
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HendricksJudy authored Dec 15, 2024
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Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions OvStudent/Converted_Scripts_Annotated/t_nocd_annotated.py
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```python
```
# Line 1: Imports the omicverse library as ov -- import omicverse as ov
# Line 2: Imports the anndata library -- import anndata
# Line 3: Imports the scanpy library as sc -- import scanpy as sc
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# Line 34: Calculates the nocd scores using the scNOCD object -- scbrca.calculate_nocd()
# Line 36: Generates a UMAP plot colored by 'leiden' and 'nocd', setting spacing and palette -- sc.pl.umap(scbrca.adata, color=['leiden','nocd'],wspace=0.4,palette=sc_color)
# Line 38: Generates a UMAP plot colored by 'leiden' and 'nocd_n', setting spacing and palette -- sc.pl.umap(scbrca.adata, color=['leiden','nocd_n'],wspace=0.4,palette=sc_color)
```
```

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