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fix an error in ov.pp.anndata_to_CPU #93
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Starlitnightly committed Jun 17, 2024
1 parent 6857b9d commit 5554d79
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion omicverse/pp/_preprocess.py
Original file line number Diff line number Diff line change
Expand Up @@ -348,7 +348,7 @@ def anndata_to_GPU(adata,**kwargs):

def anndata_to_CPU(adata,layer=None, convert_all=True, copy=False):
import rapids_singlecell as rsc
rsc.get.anndata_to_CPU(adata,layers=layer, convert_all=convert_all, copy=copy)
rsc.get.anndata_to_CPU(adata,layer=layer, convert_all=convert_all, copy=copy)


def preprocess(adata, mode='shiftlog|pearson', target_sum=50*1e4, n_HVGs=2000,
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