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olantwin committed Nov 4, 2024
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27 changes: 19 additions & 8 deletions md_CHANGELOG.html
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Expand Up @@ -92,24 +92,35 @@ <h1><a class="anchor" id="autotoc_md1"></a>
Unreleased</h1>
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Added</h2>
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Fixed</h2>
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Changed</h2>
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<h1><a class="anchor" id="autotoc_md6"></a>
24.11</h1>
<p>Release after first round of breaking changes. Requires CVMFS release ≥ 24.10. Tagged for launch of background simulations.</p>
<h2><a class="anchor" id="autotoc_md7"></a>
Added</h2>
<ul>
<li><b>EventCalc LLP event generator</b> This modification introduces a first implementation of the EventCalc decay event sampler in FairShip for inclusive final states. For further details, consult the dedicated presentation at the 30th SHiP CM <a href="https://indico.cern.ch/event/1448055/contributions/6142341/attachments/2939894/5165450/SHiP_collaboration_meeting_talk_MFerrillo.pdf">here</a>. See also #528.</li>
<li>Add a conversion script <code><a class="el" href="convertEvtCalc_8py.html">FairShip/macro/convertEvtCalc.py</a></code> to convert the EventCalc output sampled kinematics (.dat) as input to the simulation script (.root). <em>Remark</em>: This will eventually become unnecessary when this conversion is implemented within the EventCalc tool itself.</li>
</ul>
<h2><a class="anchor" id="autotoc_md3"></a>
<h2><a class="anchor" id="autotoc_md8"></a>
Fixed</h2>
<ul>
<li>Fix missing includes in <a class="el" href="classecalMatch.html">ecalMatch</a> and <a class="el" href="classecalReco.html">ecalReco</a></li>
<li>Fix compilation warnings due to unused or uninitiliazed variables #481</li>
</ul>
<h2><a class="anchor" id="autotoc_md4"></a>
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Changed</h2>
<ul>
<li><a class="el" href="namespaceshipStrawTracking.html">shipStrawTracking</a>: Move to argparse</li>
<li>CMake: Use external genfit2</li>
<li><a class="el" href="namespaceshipStrawTracking.html">shipStrawTracking</a>, <a class="el" href="namespaceshipDigiReco.html">shipDigiReco</a>, <a class="el" href="namespaceshipVertex.html">shipVertex</a>: Make compatible with current genfit</li>
</ul>
<h2><a class="anchor" id="autotoc_md5"></a>
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Removed</h2>
<ul>
<li>Remove obsolete renaming scripts</li>
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<li>Remove bundled genfit</li>
<li>Remove conditions DB, will almost certainly look different, copy in git history for reference</li>
</ul>
<h1><a class="anchor" id="autotoc_md6"></a>
<h1><a class="anchor" id="autotoc_md11"></a>
24.10 - Freiburg</h1>
<p>Tag release to prepare for breaking changes. Last release to include charm cross-section measurement code, and obsolete detector configurations.</p>
<h2><a class="anchor" id="autotoc_md7"></a>
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Added</h2>
<ul>
<li>Add option for helium-filled decay volume</li>
Expand All @@ -134,7 +145,7 @@ <h2><a class="anchor" id="autotoc_md7"></a>
<li>Add different configuration files for vacuum /helium for the Decay Vessel</li>
<li>Add option to enable/disable SND</li>
</ul>
<h2><a class="anchor" id="autotoc_md8"></a>
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<ul>
<li>Remove trailing whitespace and fix line endings</li>
Expand All @@ -145,7 +156,7 @@ <h2><a class="anchor" id="autotoc_md8"></a>
<li>Close <a class="el" href="ShipReco_8py.html">ShipReco.py</a> output file</li>
<li>Remove unused (silently ignored!) argument for <a class="el" href="classMuDISGenerator.html#ae0adf0b9bdf68dbc0ec65b853d586bc4">MuDISGenerator::SetPositions</a></li>
</ul>
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Changed</h2>
<ul>
<li>Update <a class="el" href="namespacegetGeoInformation.html">getGeoInformation</a> command line interface</li>
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<li>Housekeeping: Use find_package to find BOOST</li>
<li>Housekeeping: Set FairLogger dep instead of manual includes</li>
</ul>
<h2><a class="anchor" id="autotoc_md10"></a>
<h2><a class="anchor" id="autotoc_md15"></a>
Removed</h2>
<ul>
<li>Remove obsolete files related to old ways of installing or testing FairShip</li>
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18 changes: 9 additions & 9 deletions md_README.html
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</ul>
</li>
</ul>
<h1><a class="anchor" id="autotoc_md13"></a>
<h1><a class="anchor" id="autotoc_md18"></a>
Introduction</h1>
<p>FairShip is the software framework for the SHiP experiment which is based on FairRoot. The dependencies of FairShip are tracked and installed using <a href="https://alisw.github.io/alibuild/">alibuild</a>.</p>
<h2><a class="anchor" id="autotoc_md14"></a>
<h2><a class="anchor" id="autotoc_md19"></a>
Branches</h2>
<dl>
<dt><code>master</code> </dt>
Expand All @@ -119,7 +119,7 @@ <h2><a class="anchor" id="autotoc_md14"></a>
<dd>Branch for the muon flux analysis. Python 2 only. Requires aliBuild default <code>fairship-2018</code>. </dd>
</dl>
<p>All packages are managed in Git and GitHub. Please read <a href="https://github.com/ShipSoft/FairShip/wiki/Git-Tutorial-for-SHiP">the Git tutorial for SHiP</a> first, even if you already know Git, as it explains how development is done on GitHub.</p>
<h1><a class="anchor" id="autotoc_md15"></a>
<h1><a class="anchor" id="autotoc_md20"></a>
Build Instructions using CVMFS</h1>
<p>On <code>lxplus</code> this is the recommended way to use <code>FairShip</code>. CVMFS can also be setup on your own machine (please see the <a href="https://cvmfs.readthedocs.io/en/stable/cpt-quickstart.html">CVMFS documentation</a>)</p>
<ol type="1">
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</ol>
<p>However, this won't work if you are using HTCondor. In such case you can do:</p>
<div class="fragment"><div class="line">eval $(alienv load FairShip/latest --no-refresh)</div>
</div><!-- fragment --><h1><a class="anchor" id="autotoc_md16"></a>
</div><!-- fragment --><h1><a class="anchor" id="autotoc_md21"></a>
Local build, without access to CVMFS</h1>
<p>Commands are similar to the previous case, but without access to CVMFS you need to build the required packages.</p>
<ol type="1">
Expand All @@ -149,7 +149,7 @@ <h1><a class="anchor" id="autotoc_md15"></a>
<li>Build the software using aliBuild: ```bash aliBuild build FairShip &ndash;config-dir $SHIPDIST &ndash;defaults release ``<code> NB: Depending on the platform you might have to pass the</code>&ndash;always-prefer-system<code>or</code>&ndash;force-unknown-architecture<code>flags to aliBuild. For debugging,</code>aliDoctor` is very useful!</li>
<li>Load the environment ```bash alienv enter FairShip/latest ``` </li>
</ol>
<h1><a class="anchor" id="autotoc_md17"></a>
<h1><a class="anchor" id="autotoc_md22"></a>
Run instructions</h1>
<p>Set up the bulk of the environment from CVMFS (see the <a href="https://github.com/ShipSoft/cvmfs_release">dedicated repository</a> for information about the available releases):</p>
<div class="fragment"><div class="line">source /cvmfs/ship.cern.ch/$SHIP_RELEASE/setUp.sh</div>
Expand All @@ -169,21 +169,21 @@ <h1><a class="anchor" id="autotoc_md17"></a>
<div class="fragment"><div class="line">python -i $FAIRSHIP/macro/eventDisplay.py -f ship.conical.Pythia8-TGeant4_rec.root -g geofile_full.conical.Pythia8-TGeant4.root</div>
<div class="line">// use SHiP Event Display GUI</div>
<div class="line">Use quit() or Ctrl-D (i.e. EOF) to exit</div>
</div><!-- fragment --><h1><a class="anchor" id="autotoc_md18"></a>
</div><!-- fragment --><h1><a class="anchor" id="autotoc_md23"></a>
Docker instructions</h1>
<p>Docker is <b>not</b> the recommended way to run <code>FairShip</code> locally. It is ideal for reproducing reproducible, stateless environments for debugging, HTCondor and cluster use, or when a strict separation between <code>FairShip</code> and the host is desirable.</p>
<ol type="1">
<li>Build an docker image from the provided <code>Dockerfile</code>: ```bash git clone <a href="https://github.com/ShipSoft/FairShip.git">https://github.com/ShipSoft/FairShip.git</a> cd FairShip docker build -t fairship . ``<code></code></li>
<li><code>Run the</code>FairShip<code>docker image: </code>``bash docker run -i -t &ndash;rm fairship /bin/bash ```</li>
<li>Advanced docker run options: ```bash docker run -i -t &ndash;rm \ -e DISPLAY=unix$DISPLAY -v /tmp/.X11-unix:/tmp/.X11-unix \ -v /local_workdir:/image_workdir \ fairship /bin/bash ``<code> The option</code>-e DISPLAY=unix$DISPLAY -v /tmp/.X11-unix:/tmp/.X11-unix<code>forwards graphics from the docker to your local system (similar to</code>ssh -X<code>). The option</code>-v /local_workdir:/image_workdir<code>mounts</code>/local_workdir<code>on the local system as</code>/image_workdir` within docker.</li>
</ol>
<h1><a class="anchor" id="autotoc_md19"></a>
<h1><a class="anchor" id="autotoc_md24"></a>
Troubleshooting information</h1>
<p>Please see the wiki for <a href="https://github.com/ShipSoft/FairShip/wiki/FAQ-and-common-issues#faq">FAQ</a>s and <a href="https://github.com/ShipSoft/FairShip/wiki/FAQ-and-common-issues#common-issues">common issues</a>.</p>
<h1><a class="anchor" id="autotoc_md20"></a>
<h1><a class="anchor" id="autotoc_md25"></a>
Documentation</h1>
<p>An <a href="https://shipsoft.github.io/FairShip/">automatic class reference</a> is built using Doxygen from comments in the C++ code. Improving the comments will improve this documentation.</p>
<h1><a class="anchor" id="autotoc_md21"></a>
<h1><a class="anchor" id="autotoc_md26"></a>
Contributing code</h1>
<ul>
<li>Any and all contributions are welcome!</li>
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Expand Down Expand Up @@ -244,10 +249,5 @@ var NAVTREEINDEX31 =
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12 changes: 6 additions & 6 deletions navtreeindex32.js
Original file line number Diff line number Diff line change
@@ -1,5 +1,10 @@
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Expand Down Expand Up @@ -244,10 +249,5 @@ var NAVTREEINDEX32 =
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