Modified Docker file and added anndata to environment.yml

Dockerfile

@@ -22,10 +22,4 @@ SHELL ["/bin/bash", "-c"]
 # Activate the conda environment by default when starting a shell
 # This will ensure that the conda environment's python is used
 RUN echo "source activate molkart_local" > ~/.bashrc
-ENV BASH_ENV ~/.bashrc
-
-# Set the working directory
-WORKDIR /local
-
-# Copy the current directory contents into the container at /local
-COPY . .
+ENV BASH_ENV ~/.bashrc

environment.yml

@@ -14,6 +14,7 @@ dependencies:
   - zarr=2.3.2
   - h5py
   - procps-ng
+  - anndata
   - pip
   - pip:
     - palom