Move environment YAML file and requirements.txt to new envs/ sub-…

…directory (#116)

* Move SalishSeaTools environment.yaml to envs/ dir

Updated paths in documentation and comments to reflect the file move. This
reorganization improves structure by grouping environment-related files
under the `envs` directory.

* Move SalishSeaTools requirements.txt to envs/ dir

Moved requirements.txt to the 'envs/' directory for better organization and
clarity. Updated the comment to reflect the new file path for maintaining
dependencies.

* Rename environment.yaml to environment-dev.yaml

This change updates the environment file name to better reflect its purpose
as a development environment configuration. All references in documentation
and related files have been updated accordingly for consistency.

SalishSeaTools/docs/development.rst

@@ -69,7 +69,7 @@ and building the documentation with the commands:
 .. code-block:: bash
 
     $ cd tools
-    $ conda env create -f SalishSeaTools/environment.yaml
+    $ conda env create -f SalishSeaTools/envs/environment-dev.yaml
     $ conda activate salishsea-tools
     (salishsea-tools)$ pip install --editable SalishSeaTools
 

SalishSeaTools/environment.yaml → SalishSeaTools/envs/environment-dev.yaml

@@ -5,11 +5,11 @@
 # of the SalishSeaTools package with:
 #
 #   $ cd tools
-#   $ conda env create -f SalishSeaTools/environment.yaml
+#   $ conda env create -f SalishSeaTools/envs/environment-dev.yaml
 #   $ conda activate salishsea-tools
 #   (salishsea-tools)$ python -m pip install --editable SalishSeaTools
 #
-# See the requirements.txt file for an exhaustive list of all of the
+# See the envs/requirements.txt file for an exhaustive list of all the
 # packages installed in the environment and their versions used in
 # recent development.
 

SalishSeaTools/requirements.txt → SalishSeaTools/envs/requirements.txt

@@ -1,11 +1,11 @@
 # Python packages and version used in development environment
 #
 # This list is intended to be for reference only.
-# Use the conda environment description file (environment.yaml)
+# Use the conda environment description file (envs/environment-dev.yaml)
 # to create an isolated development environment.
 #
 # Create/update this file with:
-#   (salishsea-tools)$ python -m pip list --format=freeze >> SalishSeaTools/requirements.txt
+#   (salishsea-tools)$ python -m pip list --format=freeze >> SalishSeaTools/envs/requirements.txt
 
 alabaster==1.0.0
 angles==2.0

SalishSeaTools/setup.py

@@ -42,7 +42,7 @@
 except IOError:
     long_description = ''
 install_requires = [
-    # see requirements.txt for versions most recently used in development
+    # see envs/requirements.txt for versions most recently used in development
     'angles',
     'arrow>=1.0.0',
     'bottleneck',