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Add V21-11 month averaged fields datasets (#23)
* Add ubcSSg3DChemistryFields1moV21-11 dataset * Correct ubcSSg3DChemistryFields1moV21-11 file name regex * Fix ubcSSg3DChemistryFields1moV21-11 coord & var attrs They are different to hourly average files from NEMO because month average files are created by Reshapr * Add ubcSSg3DPhysicsFields1moV21-11 dataset * Add ubcSSg3DBiologyFields1moV21-11 dataset * Add ubcSSg3DLightFields1moV21-11 dataset * Drop testOutOfDate attr from V19-05 month-avg datasets
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datasets/ssc-nemo-202111/month-average/ubcSSg3DBiologyFields1moV21-11.xml
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datasets/ssc-nemo-202111/month-average/ubcSSg3DChemistryFields1moV21-11.xml
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,237 @@ | ||
| <dataset type="EDDGridFromNcFiles" datasetID="ubcSSg3DChemistryFields1moV21-11" active="true"> | ||
| <reloadEveryNMinutes>10080</reloadEveryNMinutes> | ||
| <updateEveryNMillis>10000</updateEveryNMillis> | ||
| <fileDir>/results2/SalishSea/month-avg.202111/</fileDir> | ||
| <recursive>true</recursive> | ||
| <fileNameRegex>.*SalishSeaCast_1m_chem_T_\d{8}_\d{8}\.nc$</fileNameRegex> | ||
| <metadataFrom>last</metadataFrom> | ||
| <matchAxisNDigits>20</matchAxisNDigits> | ||
| <fileTableInMemory>false</fileTableInMemory> | ||
| <accessibleViaFiles>false</accessibleViaFiles> | ||
| <!-- sourceAttributes> | ||
| <att name="Conventions">CF-1.6</att> | ||
| <att name="description">ocean T grid variables</att> | ||
| <att name="title">ocean T grid variables</att> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="testOutOfDate">now-36days</att> | ||
| <att name="cdm_data_type">Grid</att> | ||
| <att name="Conventions">CF-1.6, COARDS, ACDD-1.3</att> | ||
| <att name="infoUrl">https://salishsea.eos.ubc.ca/</att> | ||
| <att name="institution">UBC EOAS</att> | ||
| <att name="institution_fullname">Earth, Ocean & Atmospheric Sciences, University of British Columbia</att> | ||
| <att name="keywords"> | ||
| alkalinity, | ||
| carbon, chemistry, concentration, depth, dissolved, dissolved_inorganic_carbon, dissolved_oxygen, | ||
| Earth Science > Oceans > Ocean Chemistry > Alkalinity, | ||
| Earth Science > Oceans > Ocean Chemistry > Carbon, | ||
| Earth Science > Oceans > Ocean Chemistry > Inorganic Carbon, | ||
| Earth Science > Oceans > Ocean Chemistry > Oxygen, | ||
| mole_concentration_of_dissolved_inorganic_carbon_in_sea_water, | ||
| mole_concentration_of_dissolved_molecular_oxygen_in_sea_water, | ||
| O2, ocean, oceans, oxygen, | ||
| sea, sea_water_alkalinity_expressed_as_mole_equivalent, | ||
| seawater, time, total_alkalinity, water | ||
| </att> | ||
| <att name="license">The SalishSeaCast NEMO model results are copyright | ||
| by the SalishSeaCast Project Contributors and The University of British Columbia. | ||
|
|
||
| They are licensed under the Apache License, Version 2.0. https://www.apache.org/licenses/LICENSE-2.0</att> | ||
| <att name="standard_name_vocabulary">CF Standard Name Table v29</att> | ||
| <att name="summary">Green, Salish Sea, 3d Chemistry Fields, Monthly, v21-11 | ||
|
|
||
| 3d dissolved inorganic carbon, dissolved oxygen, and total alkalinity field values averaged over | ||
| 1 month intervals from SalishSeaCast NEMO model runs with physics, biology and chemistry. | ||
| The values are calculated for the entire model grid that includes the Juan de Fuca Strait, | ||
| the Strait of Georgia, Puget Sound, and Johnstone Strait on the coasts of Washington State and British Columbia. | ||
| The time values are UTC. | ||
| They are the centre of the intervals over which the calculated model results are averaged; | ||
| e.g. the field average values for January 2007 have a time value of 2007-01-16 12:00:00Z. | ||
| Geo-location and depth data for the SalishSeaCast NEMO model grid are available in the ubcSSnBathymetryV21-08 dataset. | ||
|
|
||
| v21-11: NEMO-3.6 SalishSeaCast-202111 configuration; ubcSSnBathymetryV21-08 bathymetry; | ||
| see infoUrl link for full details. | ||
| Dissolved inorganic carbon, dissolved oxygen, and total alkalinity variables. | ||
| </att> | ||
| <att name="title">Green, Salish Sea, 3d Chemistry Fields, Monthly, v21-11</att> | ||
| <att name="project">SalishSeaCast NEMO Model</att> | ||
| <att name="creator_name">SalishSeaCast Project Contributors</att> | ||
| <att name="creator_email">[email protected]</att> | ||
| <att name="creator_url">https://salishsea-meopar-docs.readthedocs.io/</att> | ||
| <att name="acknowledgement">MEOPAR, Ocean Networks Canada (ONC), Digital Research Alliance of Canada</att> | ||
| <att name="comment">If you use this dataset in your research, | ||
| please reference it with wording similar to the example below, | ||
| and include citations of the publications below. | ||
| Inclusion of the date(s) when you downloaded the dataset, | ||
| and the dataset id help to ensure reproducibility of your work. | ||
|
|
||
| Example wording: | ||
|
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||
| 3d SKOG carbon chemistry and oxygen fields from the SalishSeaCast NEMO model | ||
| (Soontiens et al, 2016; Soontiens and Allen, 2017, Jarníková et al, 2022) | ||
| were downloaded from their ERDDAP server | ||
| (https://salishsea.eos.ubc.ca/erddap/) | ||
| on DATE from dataset ubcSSg3DChemistryFields1moV21-11. | ||
|
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||
| Citations: | ||
|
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||
| Soontiens, N., Allen, S., Latornell, D., Le Souef, K., Machuca, I., Paquin, J.-P., Lu, Y., Thompson, K., Korabel, V., 2016. | ||
| Storm surges in the Strait of Georgia simulated with a regional model. Atmosphere-Ocean 54 1-21. | ||
| https://dx.doi.org/10.1080/07055900.2015.1108899 | ||
|
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| Soontiens, N. and Allen, S., 2017. | ||
| Modelling sensitivities to mixing and advection in a sill-basin estuarine system. Ocean Modelling, 112, 17-32. | ||
| https://dx.doi.org/10.1016/j.ocemod.2017.02.008 | ||
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||
| Jarníková T., Ianson D., Allen S.E., Shao A.E., Olson E.M.. 2022. | ||
| Anthropogenic carbon increase has caused critical shifts in aragonite saturation across a sensitive coastal system. | ||
| Global Biogeochemical Cycles, 36(7). | ||
| https://doi.org/10.1029/2021GB007024 | ||
| </att> | ||
| <att name="drawLandMask">over</att> | ||
| <att name="history">null</att> | ||
| <att name="NCO">null</att> | ||
| <att name="name">null</att> | ||
| <att name="description">biogeochemical variables</att> | ||
| </addAttributes> | ||
| <axisVariable> | ||
| <sourceName>time</sourceName> | ||
| <destinationName>time</destinationName> | ||
| <!-- sourceAttributes> | ||
| <att name="_ChunkSizes" type="int">1</att> | ||
| <att name="calendar">proleptic_gregorian</att> | ||
| <att name="long_name">Time axis</att> | ||
| <att name="standard_name">time</att> | ||
| <att name="time_origin">2007-01-01 12:00:00</att> | ||
| <att name="units">days since 2007-01-01T12:00:00</att> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="_ChunkSizes">null</att> | ||
| <att name="coverage_content_type">modelResult</att> | ||
| <att name="comment"> | ||
| time values are UTC at the centre of the intervals over which the calculated model results are averaged; | ||
| e.g. the field average values for January 2022 have a time value of 2022-01-15 12:00:00Z, | ||
| and those for April 2022 have a time value of 2022-04-15 00:00:00Z | ||
| </att> | ||
| <att name="ioos_category">time</att> | ||
| </addAttributes> | ||
| </axisVariable> | ||
| <axisVariable> | ||
| <sourceName>depth</sourceName> | ||
| <destinationName>depth</destinationName> | ||
| <!-- sourceAttributes> | ||
| <att name="_ChunkSizes" type="int">40</att> | ||
| <att name="standard_name">sea_floor_depth</att> | ||
| <att name="long_name">Sea Floor Depth</att> | ||
| <att name="positive">down</att> | ||
| <att name="units">metres</att> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="_ChunkSizes">null</att> | ||
| <att name="long_name">Depth</att> | ||
| <att name="standard_name">depth</att> | ||
| <att name="units">m</att> | ||
| <att name="coverage_content_type">modelResult</att> | ||
| <att name="ioos_category">location</att> | ||
| </addAttributes> | ||
| </axisVariable> | ||
| <axisVariable> | ||
| <sourceName>gridY</sourceName> | ||
| <destinationName>gridY</destinationName> | ||
| <!-- sourceAttributes> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="long_name">Grid Y</att> | ||
| <att name="standard_name">y</att> | ||
| <att name="coverage_content_type">modelResult</att> | ||
| <att name="comment">gridY values are grid indices in the model y-direction; | ||
| geo-location data for the SalishSeaCast NEMO model grid is available in the ubcSSnBathymetryV21-08 dataset. | ||
| </att> | ||
| <att name="ioos_category">location</att> | ||
| </addAttributes> | ||
| </axisVariable> | ||
| <axisVariable> | ||
| <sourceName>gridX</sourceName> | ||
| <destinationName>gridX</destinationName> | ||
| <!-- sourceAttributes> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="long_name">Grid X</att> | ||
| <att name="standard_name">x</att> | ||
| <att name="coverage_content_type">modelResult</att> | ||
| <att name="comment">gridX values are grid indices in the model x-direction; | ||
| geo-location data for the SalishSeaCast NEMO model grid is available in the ubcSSnBathymetryV21-08 dataset. | ||
| </att> | ||
| <att name="ioos_category">location</att> | ||
| </addAttributes> | ||
| </axisVariable> | ||
|
|
||
| <dataVariable> | ||
| <sourceName>dissolved_inorganic_carbon</sourceName> | ||
| <destinationName>dissolved_inorganic_carbon</destinationName> | ||
| <dataType>float</dataType> | ||
| <!-- sourceAttributes> | ||
| <att name="_ChunkSizes" type="intList">1 40 898 398</att> | ||
| <att name="_FillValue" type="float">NaNf</att> | ||
| <att name="long_name">Dissolved Inorganic C Concentration</att> | ||
| <att name="standard_name">mole_concentration_of_dissolved_inorganic_carbon_in_sea_water</att> | ||
| <att name="units">mmol m-3</att> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="long_name">Dissolved Inorganic C Concentration</att> | ||
| <att name="standard_name">mole_concentration_of_dissolved_inorganic_carbon_in_sea_water</att> | ||
| <att name="units">mmol m-3</att> | ||
| <att name="ioos_category">co2</att> | ||
| <att name="colorBarMaximum" type="double">2400.0</att> | ||
| <att name="colorBarMinimum" type="double">600.0</att> | ||
| <att name="_ChunkSizes">null</att> | ||
| <att name="coverage_content_type">modelResult</att> | ||
| </addAttributes> | ||
| </dataVariable> | ||
|
|
||
| <dataVariable> | ||
| <sourceName>total_alkalinity</sourceName> | ||
| <destinationName>total_alkalinity</destinationName> | ||
| <dataType>float</dataType> | ||
| <!-- sourceAttributes> | ||
| <att name="_ChunkSizes" type="intList">1 40 898 398</att> | ||
| <att name="_FillValue" type="float">NaNf</att> | ||
| <att name="long_name">Total Alkalinity Concentration</att> | ||
| <att name="standard_name">sea_water_alkalinity_expressed_as_mole_equivalent</att> | ||
| <att name="units">mmol m-3</att> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="long_name">Total Alkalinity Concentration</att> | ||
| <att name="standard_name">sea_water_alkalinity_expressed_as_mole_equivalent</att> | ||
| <att name="units">mmol m-3</att> | ||
| <att name="ioos_category">co2</att> | ||
| <att name="colorBarMaximum" type="double">2400.0</att> | ||
| <att name="colorBarMinimum" type="double">500.0</att> | ||
| <att name="_ChunkSizes">null</att> | ||
| <att name="coverage_content_type">modelResult</att> | ||
| </addAttributes> | ||
| </dataVariable> | ||
|
|
||
| <dataVariable> | ||
| <sourceName>dissolved_oxygen</sourceName> | ||
| <destinationName>dissolved_oxygen</destinationName> | ||
| <dataType>float</dataType> | ||
| <!-- sourceAttributes> | ||
| <att name="_ChunkSizes" type="intList">1 40 898 398</att> | ||
| <att name="_FillValue" type="float">NaNf</att> | ||
| <att name="long_name">Dissolved Oxygen Concentration</att> | ||
| <att name="standard_name">mole_concentration_of_dissolved_molecular_oxygen_in_sea_water</att> | ||
| <att name="units">mmol m-3</att> | ||
| </sourceAttributes --> | ||
| <addAttributes> | ||
| <att name="long_name">Dissolved Oxygen Concentration</att> | ||
| <att name="standard_name">mole_concentration_of_dissolved_molecular_oxygen_in_sea_water</att> | ||
| <att name="units">mmol m-3</att> | ||
| <att name="ioos_category">dissolved_o2</att> | ||
| <att name="colorBarMaximum" type="double">500.0</att> | ||
| <att name="colorBarMinimum" type="double">0.0</att> | ||
| <att name="_ChunkSizes">null</att> | ||
| <att name="coverage_content_type">modelResult</att> | ||
| </addAttributes> | ||
| </dataVariable> | ||
| </dataset> |
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