Code

Cleanup + add strided patches#218

Code

Merged

kaczmarj merged 15 commits intomainSBU-BMI/wsinfer:mainfrom enh/cleaning-issuesSBU-BMI/wsinfer:enh/cleaning-issuesCopy head branch name to clipboardFeb 22, 2024

+165-84

Commits

Commits on Feb 22, 2024

• rm unused args, fix #185

  kaczmarj

  committed
  26f0b74

• account for empty hierarchy or patches

  Show description for 51029b2
  kaczmarj

  committed
  51029b2

• please mypy

  kaczmarj

  committed
  4dc0117

• make error message more helpful if patch dir does not exist

  kaczmarj

  committed
  54f40d9

• rm unused args in wsi patches dataset

  Show description for 78086a8
  kaczmarj

  committed
  78086a8

• check that there are patches in the loaded file

  Show description for db8c4c7
  kaczmarj

  committed
  db8c4c7

• ensure thumbnail is RGB

  Show description for 6e81da7
  kaczmarj

  committed
  6e81da7

• appease mypy

  kaczmarj

  committed
  064ba85

• test that openslide and tiffslide pad regions

  Show description for 06accf7
  kaczmarj

  committed
  06accf7

• rm unused import

  kaczmarj

  committed
  73dd4ea

• handle symlinked slides dirs

  Show description for 95e3b06
  kaczmarj

  committed
  95e3b06

• add strided patches

  Show description for a371d27
  kaczmarj

  committed
  a371d27

• save jsons with geojson ext

  kaczmarj

  committed
  c974d1b

• print some logs

  kaczmarj

  committed
  da97195

• use geojson ext for purple.json

  kaczmarj

  committed
  39d8e9d