Fix Python 3.9 julia Overhaul
#6
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| # Pure Python CI | |
| # Runs a reduced set of tests compared to CI.yml, skips CD altogether, ensure pure-python | |
| # mode (i.e. no Julia-based dependencies) works. | |
| name: Pure Python Continuous Integration | |
| on: | |
| schedule: | |
| # * is a special character in YAML so you have to quote this string | |
| - cron: "0 8 * * *" | |
| # allow running on RMG-Py on a pushed branch, only if triggered manually | |
| workflow_dispatch: | |
| # runs on PRs against RMG-Py (and anywhere else, but we add this for RMG-Py) | |
| pull_request: | |
| # this prevents one PR from simultaneously running multiple runners, which will clog up the queue | |
| # and prevent other PRs from running the CI | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| # if running on RMG-Py but requiring changes on an un-merged branch of RMG-database, replace | |
| # main with the name of the branch | |
| RMG_DATABASE_BRANCH: main | |
| jobs: | |
| build-and-test: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9"] | |
| os: [macos-13, macos-latest, ubuntu-latest] | |
| runs-on: ${{ matrix.os }} | |
| name: ${{ matrix.os }} Build and Minimal Test Python ${{ matrix.python-version }} | |
| # skip scheduled runs from forks | |
| if: ${{ !( github.repository != 'ReactionMechanismGenerator/RMG-Py' && github.event_name == 'schedule' ) }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout RMG-Py | |
| uses: actions/checkout@v4 | |
| - name: Compel Arm-based Mac to use x86 | |
| if: matrix.os == 'macos-latest' | |
| run: echo "CONDA_SUBDIR=osx-64" >> $GITHUB_ENV | |
| - name: Setup Miniforge Python ${{ matrix.python-version }} | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| environment-file: environment.yml | |
| miniforge-variant: Miniforge3 | |
| miniforge-version: latest | |
| python-version: ${{ matrix.python-version }} | |
| activate-environment: rmg_env | |
| use-mamba: true | |
| show-channel-urls: true | |
| channels: conda-forge,cantera,rmg | |
| # list the environment for debugging purposes | |
| - name: mamba info | |
| run: | | |
| mamba info | |
| mamba list | |
| # Clone RMG-database | |
| - name: Clone RMG-database | |
| run: | | |
| cd .. | |
| git clone -b $RMG_DATABASE_BRANCH https://github.com/ReactionMechanismGenerator/RMG-database.git | |
| # modify env variables as directed in the RMG installation instructions | |
| - name: Set Environment Variables | |
| run: | | |
| RUNNER_CWD=$(pwd) | |
| echo "PYTHONPATH=$RUNNER_CWD/RMG-Py:$PYTHONPATH" >> $GITHUB_ENV | |
| echo "$RUNNER_CWD/RMG-Py" >> $GITHUB_PATH | |
| # RMG build step | |
| - name: make RMG | |
| run: | | |
| make clean | |
| make | |
| - name: Install Q2DTor | |
| run: echo "" | make q2dtor | |
| # non-regression testing | |
| - name: Run Unit, Functional, and Database Tests | |
| # aggregate into one command so we only have to eat the collection time once | |
| run: make test-all |