#408 #398 curl problems

RTXteam · Sep 2, 2024 · 3488401 · 3488401
1 parent bd93687
commit 3488401
Showing 1 changed file with 4 additions and 1 deletion.
diff --git a/extract/extract-clinicaltrialskg.sh b/extract/extract-clinicaltrialskg.sh
@@ -24,7 +24,10 @@ version="2.2.6"
 clinicaltrialskg_download_link="https://db.systemsbiology.net/gestalt/KG/clinical_trials_kg_edges_v${version}.tsv"
 
 echo "# ${version}" > ${clinicaltrialskg_output_file}
-${curl_get} ${clinicaltrialskg_download_link} >> ${clinicaltrialskg_output_file}
+# ${curl_get} ${clinicaltrialskg_download_link} >> ${clinicaltrialskg_output_file}
+
+# Short term fix because download link is not resolving and I cannot identify the correct download link
+${aws_s3_cp} s3://${s3_bucket}/clinicaltrialskg-edges.tsv ${clinicaltrialskg_output_file}
 
 date
 echo "================= finishing extract-clinicaltrialskg.sh =================="