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| name: recetox-aplcms-build | ||
| channels: | ||
| - conda-forge | ||
| - bioconda | ||
| - defaults | ||
| dependencies: | ||
| - anaconda-client | ||
| - conda-build | ||
| - conda-verify | ||
| - r-base >=3.5 | ||
| - r-mass | ||
| - r-rgl | ||
| - bioconductor-mzR | ||
| - r-splines2 | ||
| - r-doparallel | ||
| - r-foreach | ||
| - r-iterators | ||
| - r-snow | ||
| - r-gbm | ||
| - r-e1071 | ||
| - r-randomForest | ||
| - r-rocr | ||
| - r-rocs | ||
| - r-rcpp | ||
| - r-arrow |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,24 @@ | ||
| name: recetox-aplcms | ||
| channels: | ||
| - conda-forge | ||
| - bioconda | ||
| - defaults | ||
| dependencies: | ||
| - r-base >= 3.5 | ||
| - r-devtools | ||
| - r-biocmanager | ||
| - r-mass | ||
| - r-rgl | ||
| - bioconductor-mzR | ||
| - r-splines2 | ||
| - r-doparallel | ||
| - r-foreach | ||
| - r-iterators | ||
| - r-snow | ||
| - r-gbm | ||
| - r-e1071 | ||
| - r-randomForest | ||
| - r-rocr | ||
| - r-rocs | ||
| - r-rcpp | ||
| - r-arrow |
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| {% set name = "recetox-aplcms" %} | ||
| {% set version = "0.9.3" %} | ||
| {% set github = "https://github.com/RECETOX/recetox-aplcms" %} | ||
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| package: | ||
| name: "r-{{ name|lower }}" | ||
| version: "{{ version }}" | ||
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| source: | ||
| path: .. | ||
|
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| build: | ||
| number: 0 | ||
| noarch: generic | ||
| rpaths: | ||
| - lib/ | ||
| - lib/R/lib/ | ||
| script: R CMD INSTALL --build . | ||
|
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| requirements: | ||
| host: | ||
| - r-base >=3.5 | ||
| - r-mass | ||
| - r-rgl | ||
| - bioconductor-mzR | ||
| - r-splines2 | ||
| - r-doparallel | ||
| - r-foreach | ||
| - r-iterators | ||
| - r-snow | ||
| - r-gbm | ||
| - r-e1071 | ||
| - r-randomForest | ||
| - r-rocr | ||
| - r-rocs | ||
| - r-rcpp | ||
|
|
||
| run: | ||
| - r-base >=3.5 | ||
| - r-devtools | ||
| - r-biocmanager | ||
| - r-mass | ||
| - r-rgl | ||
| - bioconductor-mzR | ||
| - r-splines2 | ||
| - r-doparallel | ||
| - r-foreach | ||
| - r-iterators | ||
| - r-snow | ||
| - r-gbm | ||
| - r-e1071 | ||
| - r-randomForest | ||
| - r-rocr | ||
| - r-rocs | ||
| - r-rcpp | ||
| - r-arrow | ||
|
|
||
| test: | ||
| commands: | ||
| - $R -e "library(recetox.aplcms)" | ||
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| about: | ||
| home: "{{ github }}" | ||
| license: GPL2.0 | ||
| summary: apLCMS is a software which generates a feature table from a batch of LC/MS spectra. A modified fork of the original apLCMS by Tianwei Yu. | ||
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| extra: | ||
| maintainers: | ||
| - RECETOX/conda | ||
| identifiers: | ||
| - doi:10.1093/bioinformatics/btp291 |