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Unify packaging management #121

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merged 13 commits into from
Aug 16, 2022
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@xtrojak xtrojak commented Aug 8, 2022

This PR is targeting package management issues raised in #115 as part of JOSS review.

It is not possible to unify the environment and packaging management completely. The reason is the dependencies cannot be installed using pip in conda package (see this discussion).

However, in a conda environment, we can use pip packages. It is also possible to load requirements.txt in setup.py config, but the files must be specified in MANIFEST.in to be included in the pypi package.

Close #115.

@xtrojak xtrojak requested a review from hechth August 9, 2022 09:05
@xtrojak xtrojak marked this pull request as ready for review August 9, 2022 09:05
@xtrojak xtrojak requested a review from maximskorik August 9, 2022 09:05
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Looks good to me!

@hechth hechth merged commit 710dbf8 into RECETOX:main Aug 16, 2022
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[Packaging] Can the environment and packaging management be more unified?
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