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Updated samtools faidx to 1.21 #152

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Oct 10, 2024
Merged

Updated samtools faidx to 1.21 #152

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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -9,6 +9,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

1. Added Gfastats [#126](https://github.com/Plant-Food-Research-Open/assemblyqc/issues/126)
2. Updated nf-core/template to 3.0.1 [#149](https://github.com/Plant-Food-Research-Open/assemblyqc/issues/149)
3. Updated `samtools faidx` to 1.21

### `Fixed`

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90 changes: 45 additions & 45 deletions modules.json
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Expand Up @@ -7,107 +7,107 @@
"gallvp": {
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}
}
Expand All @@ -131,7 +131,7 @@
},
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}
}
Expand All @@ -142,27 +142,27 @@
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},
"gfastats": {
Expand All @@ -172,82 +172,82 @@
},
"gunzip": {
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}
}
Expand All @@ -271,12 +271,12 @@
},
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},
"utils_nfschema_plugin": {
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2 changes: 1 addition & 1 deletion modules/gallvp/busco/busco/main.nf
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Expand Up @@ -11,7 +11,7 @@ process BUSCO_BUSCO {
tuple val(meta), path(fasta, stageAs:'tmp_input/*')
val mode // Required: One of genome, proteins, or transcriptome
val lineage // Required: lineage to check against, "auto" enables --auto-lineage instead
path busco_lineages_path // Recommended: path to busco lineages - downloads if not set
path busco_lineages_path // Recommended: p_ath to busco lineages - downloads if not set
path config_file // Optional: busco configuration file

output:
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