Deploying to gh-pages from @ f40728b 🚀

Parallel-in-Time · Sep 22, 2023 · 9aa82b8 · 9aa82b8
1 parent 8e50606
commit 9aa82b8
Show file tree

Hide file tree

Showing 362 changed files with 1,207 additions and 1,151 deletions.
diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle
diff --git a/.doctrees/projects/Hamiltonian.doctree b/.doctrees/projects/Hamiltonian.doctree
diff --git a/.doctrees/projects/doc_fput.doctree b/.doctrees/projects/doc_fput.doctree
diff --git a/.doctrees/projects/doc_matrixPFASST_matrix.doctree b/.doctrees/projects/doc_matrixPFASST_matrix.doctree
diff --git a/.doctrees/projects/doc_matrixPFASST_propagator.doctree b/.doctrees/projects/doc_matrixPFASST_propagator.doctree
diff --git a/.doctrees/projects/matrixPFASST.doctree b/.doctrees/projects/matrixPFASST.doctree
diff --git a/.doctrees/pySDC/implementations.convergence_controller_classes.adaptivity.doctree b/.doctrees/pySDC/implementations.convergence_controller_classes.adaptivity.doctree
diff --git a/.doctrees/pySDC/implementations.convergence_controller_classes.doctree b/.doctrees/pySDC/implementations.convergence_controller_classes.doctree
diff --git a/...sses.estimate_interpolation_error.doctree → ...classes.estimate_polynomial_error.doctree b/...sses.estimate_interpolation_error.doctree → ...classes.estimate_polynomial_error.doctree
diff --git a/.doctrees/tutorial/doc_step_1_A.doctree b/.doctrees/tutorial/doc_step_1_A.doctree
diff --git a/.doctrees/tutorial/doc_step_1_B.doctree b/.doctrees/tutorial/doc_step_1_B.doctree
diff --git a/.doctrees/tutorial/doc_step_1_D.doctree b/.doctrees/tutorial/doc_step_1_D.doctree
diff --git a/.doctrees/tutorial/doc_step_2_A.doctree b/.doctrees/tutorial/doc_step_2_A.doctree
diff --git a/.doctrees/tutorial/doc_step_2_B.doctree b/.doctrees/tutorial/doc_step_2_B.doctree
diff --git a/.doctrees/tutorial/doc_step_2_C.doctree b/.doctrees/tutorial/doc_step_2_C.doctree
diff --git a/.doctrees/tutorial/doc_step_3_A.doctree b/.doctrees/tutorial/doc_step_3_A.doctree
diff --git a/.doctrees/tutorial/doc_step_3_B.doctree b/.doctrees/tutorial/doc_step_3_B.doctree
diff --git a/.doctrees/tutorial/doc_step_3_C.doctree b/.doctrees/tutorial/doc_step_3_C.doctree
diff --git a/.doctrees/tutorial/doc_step_4_C.doctree b/.doctrees/tutorial/doc_step_4_C.doctree
diff --git a/.doctrees/tutorial/doc_step_4_D.doctree b/.doctrees/tutorial/doc_step_4_D.doctree
diff --git a/.doctrees/tutorial/doc_step_7_A.doctree b/.doctrees/tutorial/doc_step_7_A.doctree
diff --git a/.doctrees/tutorial/doc_step_7_B.doctree b/.doctrees/tutorial/doc_step_7_B.doctree
diff --git a/.doctrees/tutorial/doc_step_7_C.doctree b/.doctrees/tutorial/doc_step_7_C.doctree
diff --git a/.doctrees/tutorial/doc_step_8_B.doctree b/.doctrees/tutorial/doc_step_8_B.doctree
diff --git a/.doctrees/tutorial/doc_step_8_C.doctree b/.doctrees/tutorial/doc_step_8_C.doctree
diff --git a/.doctrees/tutorial/step_1.doctree b/.doctrees/tutorial/step_1.doctree
diff --git a/.doctrees/tutorial/step_2.doctree b/.doctrees/tutorial/step_2.doctree
diff --git a/.doctrees/tutorial/step_3.doctree b/.doctrees/tutorial/step_3.doctree
diff --git a/.doctrees/tutorial/step_4.doctree b/.doctrees/tutorial/step_4.doctree
diff --git a/.doctrees/tutorial/step_7.doctree b/.doctrees/tutorial/step_7.doctree
diff --git a/.doctrees/tutorial/step_8.doctree b/.doctrees/tutorial/step_8.doctree
diff --git a/_images/convergence.png b/_images/convergence.png
diff --git a/_images/fput_hamiltonian.png b/_images/fput_hamiltonian.png
diff --git a/_images/full_solar_system_hamiltonian.png b/_images/full_solar_system_hamiltonian.png
diff --git a/_images/harmonic_hamiltonian.png b/_images/harmonic_hamiltonian.png
diff --git a/_images/henonheiles_hamiltonian.png b/_images/henonheiles_hamiltonian.png
diff --git a/_images/iteration.png b/_images/iteration.png
diff --git a/_images/outer_solar_system_hamiltonian.png b/_images/outer_solar_system_hamiltonian.png
diff --git a/_images/parallelSDC_preconditioner_vanderpol.png b/_images/parallelSDC_preconditioner_vanderpol.png
diff --git a/_images/piline_hotrod_1procs.png b/_images/piline_hotrod_1procs.png
diff --git a/_images/piline_hotrod_4procs.png b/_images/piline_hotrod_4procs.png
diff --git a/_images/piline_hotrod_adaptive_1procs.png b/_images/piline_hotrod_adaptive_1procs.png
diff --git a/_images/piline_hotrod_adaptive_4procs.png b/_images/piline_hotrod_adaptive_4procs.png
diff --git a/_images/piline_solution_adaptive.png b/_images/piline_solution_adaptive.png
diff --git a/_images/step_1_accuracy_test_coll.png b/_images/step_1_accuracy_test_coll.png
diff --git a/_images/step_1_accuracy_test_space.png b/_images/step_1_accuracy_test_space.png
diff --git a/_images/step_8_residuals.png b/_images/step_8_residuals.png
diff --git a/_images/timings_SDC_variants_Fisher.png b/_images/timings_SDC_variants_Fisher.png
diff --git a/_images/timings_SDC_variants_GrayScott.png b/_images/timings_SDC_variants_GrayScott.png
diff --git a/_modules/implementations/convergence_controller_classes/adaptivity.html b/_modules/implementations/convergence_controller_classes/adaptivity.html
@@ -916,18 +916,18 @@ <h1>Source code for implementations.convergence_controller_classes.adaptivity</h
 
 
 
-<div class="viewcode-block" id="AdaptivityInterpolationError">
-<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityInterpolationError">[docs]</a>
-<span class="k">class</span> <span class="nc">AdaptivityInterpolationError</span><span class="p">(</span><span class="n">AdaptivityForConvergedCollocationProblems</span><span class="p">):</span>
+<div class="viewcode-block" id="AdaptivityPolynomialError">
+<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityPolynomialError">[docs]</a>
+<span class="k">class</span> <span class="nc">AdaptivityPolynomialError</span><span class="p">(</span><span class="n">AdaptivityForConvergedCollocationProblems</span><span class="p">):</span>
 <span class="w">    </span><span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Class to compute time step size adaptively based on error estimate obtained from interpolation within the quadrature</span>
 <span class="sd">    nodes.</span>
 
 <span class="sd">    This error estimate depends on solving the collocation problem exactly, so make sure you set a sufficient stopping criterion.</span>
 <span class="sd">    &quot;&quot;&quot;</span>
 
-<div class="viewcode-block" id="AdaptivityInterpolationError.setup">
-<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityInterpolationError.setup">[docs]</a>
+<div class="viewcode-block" id="AdaptivityPolynomialError.setup">
+<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityPolynomialError.setup">[docs]</a>
     <span class="k">def</span> <span class="nf">setup</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">controller</span><span class="p">,</span> <span class="n">params</span><span class="p">,</span> <span class="n">description</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
         <span class="kn">from</span> <span class="nn">pySDC.implementations.convergence_controller_classes.check_convergence</span> <span class="kn">import</span> <span class="n">CheckConvergence</span>
 
@@ -940,14 +940,14 @@ <h1>Source code for implementations.convergence_controller_classes.adaptivity</h
         <span class="k">return</span> <span class="p">{</span><span class="o">**</span><span class="n">defaults</span><span class="p">,</span> <span class="o">**</span><span class="nb">super</span><span class="p">()</span><span class="o">.</span><span class="n">setup</span><span class="p">(</span><span class="n">controller</span><span class="p">,</span> <span class="n">params</span><span class="p">,</span> <span class="n">description</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">)}</span></div>
 
 
-<div class="viewcode-block" id="AdaptivityInterpolationError.get_convergence">
-<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityInterpolationError.get_convergence">[docs]</a>
+<div class="viewcode-block" id="AdaptivityPolynomialError.get_convergence">
+<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityPolynomialError.get_convergence">[docs]</a>
     <span class="k">def</span> <span class="nf">get_convergence</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">controller</span><span class="p">,</span> <span class="n">S</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
         <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">check_convergence</span><span class="p">(</span><span class="n">S</span><span class="p">)</span></div>
 
 
-<div class="viewcode-block" id="AdaptivityInterpolationError.dependencies">
-<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityInterpolationError.dependencies">[docs]</a>
+<div class="viewcode-block" id="AdaptivityPolynomialError.dependencies">
+<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityPolynomialError.dependencies">[docs]</a>
     <span class="k">def</span> <span class="nf">dependencies</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">controller</span><span class="p">,</span> <span class="n">description</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
 <span class="w">        </span><span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">        Load the error estimator.</span>
@@ -959,22 +959,22 @@ <h1>Source code for implementations.convergence_controller_classes.adaptivity</h
 <span class="sd">        Returns:</span>
 <span class="sd">            None</span>
 <span class="sd">        &quot;&quot;&quot;</span>
-        <span class="kn">from</span> <span class="nn">pySDC.implementations.convergence_controller_classes.estimate_interpolation_error</span> <span class="kn">import</span> <span class="p">(</span>
-            <span class="n">EstimateInterpolationError</span><span class="p">,</span>
+        <span class="kn">from</span> <span class="nn">pySDC.implementations.convergence_controller_classes.estimate_polynomial_error</span> <span class="kn">import</span> <span class="p">(</span>
+            <span class="n">EstimatePolynomialError</span><span class="p">,</span>
         <span class="p">)</span>
 
         <span class="nb">super</span><span class="p">()</span><span class="o">.</span><span class="n">dependencies</span><span class="p">(</span><span class="n">controller</span><span class="p">,</span> <span class="n">description</span><span class="p">)</span>
 
         <span class="n">controller</span><span class="o">.</span><span class="n">add_convergence_controller</span><span class="p">(</span>
-            <span class="n">EstimateInterpolationError</span><span class="p">,</span>
+            <span class="n">EstimatePolynomialError</span><span class="p">,</span>
             <span class="n">description</span><span class="o">=</span><span class="n">description</span><span class="p">,</span>
             <span class="n">params</span><span class="o">=</span><span class="p">{},</span>
         <span class="p">)</span>
         <span class="k">return</span> <span class="kc">None</span></div>
 
 
-<div class="viewcode-block" id="AdaptivityInterpolationError.get_new_step_size">
-<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityInterpolationError.get_new_step_size">[docs]</a>
+<div class="viewcode-block" id="AdaptivityPolynomialError.get_new_step_size">
+<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityPolynomialError.get_new_step_size">[docs]</a>
     <span class="k">def</span> <span class="nf">get_new_step_size</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">controller</span><span class="p">,</span> <span class="n">S</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
 <span class="w">        </span><span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">        Determine a step size for the next step from the error estimate.</span>
@@ -990,7 +990,7 @@ <h1>Source code for implementations.convergence_controller_classes.adaptivity</h
             <span class="n">L</span> <span class="o">=</span> <span class="n">S</span><span class="o">.</span><span class="n">levels</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
 
             <span class="c1"># compute next step size</span>
-            <span class="n">order</span> <span class="o">=</span> <span class="n">L</span><span class="o">.</span><span class="n">sweep</span><span class="o">.</span><span class="n">coll</span><span class="o">.</span><span class="n">num_nodes</span>
+            <span class="n">order</span> <span class="o">=</span> <span class="n">L</span><span class="o">.</span><span class="n">status</span><span class="o">.</span><span class="n">order_embedded_estimate</span>
 
             <span class="n">e_est</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">get_local_error_estimate</span><span class="p">(</span><span class="n">controller</span><span class="p">,</span> <span class="n">S</span><span class="p">)</span>
             <span class="n">L</span><span class="o">.</span><span class="n">status</span><span class="o">.</span><span class="n">dt_new</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">compute_optimal_step_size</span><span class="p">(</span>
@@ -1007,8 +1007,8 @@ <h1>Source code for implementations.convergence_controller_classes.adaptivity</h
         <span class="k">return</span> <span class="kc">None</span></div>
 
 
-<div class="viewcode-block" id="AdaptivityInterpolationError.get_local_error_estimate">
-<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityInterpolationError.get_local_error_estimate">[docs]</a>
+<div class="viewcode-block" id="AdaptivityPolynomialError.get_local_error_estimate">
+<a class="viewcode-back" href="../../../pySDC/implementations.convergence_controller_classes.adaptivity.html#implementations.convergence_controller_classes.adaptivity.AdaptivityPolynomialError.get_local_error_estimate">[docs]</a>
     <span class="k">def</span> <span class="nf">get_local_error_estimate</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">controller</span><span class="p">,</span> <span class="n">S</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
 <span class="w">        </span><span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">        Get the embedded error estimate of the finest level of the step.</span>