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@PROBIC

Probabilistic Inference, Privacy and Computational Biology group @ UH

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  1. mGEMS mGEMS Public

    mGEMS Genomic epidemiology with mixed samples

    C++ 16 1

  2. mSWEEP mSWEEP Public

    mSWEEP High-resolution sweep metagenomics using fast probabilistic inference

    C++ 13 2

  3. BIB BIB Public

    Bayesian Identification of Bacteria

    Python 6 1

  4. diffsplicing diffsplicing Public

    Analysis of differential RNA splicing from RNA-seq time series data

    R 3

  5. l1-inconsistency l1-inconsistency Public

    Code for experiments in inconsistency of l1-regularised sparse precision matrix estimation

    OpenEdge ABL 1

  6. edward edward Public

    Forked from blei-lab/edward

    A library for probabilistic modeling, inference, and criticism. Deep generative models, variational inference. Runs on TensorFlow.

    Python 1

Repositories

Showing 10 of 15 repositories
  • MIA-HPO Public

    Analysing the privacy leakage due to HPO under DP

    PROBIC/MIA-HPO’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Nov 5, 2024
  • mSWEEP Public

    mSWEEP High-resolution sweep metagenomics using fast probabilistic inference

    PROBIC/mSWEEP’s past year of commit activity
    C++ 13 MIT 2 1 0 Updated Oct 16, 2024
  • omics-time-annotation Public

    A supervised time annotation method for omics experiments using Gaussian processes

    PROBIC/omics-time-annotation’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 15, 2024
  • mGEMS Public

    mGEMS Genomic epidemiology with mixed samples

    PROBIC/mGEMS’s past year of commit activity
    C++ 16 MIT 1 3 0 Updated Sep 4, 2024
  • MMDPGP-clustering Public

    A clustering method for gene expression time series with multiple replicates which uses Dirichlet processes and Gaussian process

    PROBIC/MMDPGP-clustering’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 16, 2024
  • hyperparameters-neural-architectures-in-dp-dl Public

    Repository for the mimic-III models of the hyperparameters and neural architectures in differentially private deep learning master thesis

    PROBIC/hyperparameters-neural-architectures-in-dp-dl’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 14, 2022
  • d3p-paper-experiments Public

    Experiments for d3p paper

    PROBIC/d3p-paper-experiments’s past year of commit activity
    Python 0 0 0 0 Updated Feb 11, 2022
  • GPrank Public

    GPrank - R package

    PROBIC/GPrank’s past year of commit activity
    R 0 1 0 0 Updated Jun 18, 2018
  • tigreBrowserWriter Public

    R package for writing tigrebrowser databases

    PROBIC/tigreBrowserWriter’s past year of commit activity
    R 0 0 0 0 Updated Jun 7, 2018
  • BIB-S-aureus-example Public

    Example of using BIB to identify Staphylococcus aureus strains

    PROBIC/BIB-S-aureus-example’s past year of commit activity
    Shell 0 MIT 1 0 0 Updated Oct 30, 2017

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