Bug fix for pcmdi landmask regrid #50
Workflow file for this run
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| name: CI/CD Build Workflow | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| workflow_dispatch: | |
| jobs: | |
| check-jobs-to-skip: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| should_skip: ${{ steps.skip_check.outputs.should_skip }} | |
| steps: | |
| - id: skip_check | |
| uses: fkirc/skip-duplicate-actions@master | |
| with: | |
| cancel_others: true | |
| paths_ignore: '["**/README.md", "**/docs/**", "**/ISSUE_TEMPLATE/**", "**/pull_request_template.md", "**/.vscode/**"]' | |
| pre-commit-hooks: | |
| needs: check-jobs-to-skip | |
| if: ${{ needs.check-jobs-to-skip.outputs.should_skip != 'true'}} || ${{ github.event_name == 'push' }} | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 10 | |
| steps: | |
| - uses: actions/setup-node@v3 | |
| with: | |
| node-version: '16' | |
| - name: Checkout Code Repository | |
| uses: actions/checkout@v3 | |
| with: | |
| node-version: '16' | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| node-version: '16' | |
| python-version: '3.10' | |
| # Run all pre-commit hooks on all the files. | |
| # Getting only staged files can be tricky in case a new PR is opened | |
| # since the action is run on a branch in detached head state | |
| - name: Install and Run Pre-commit | |
| uses: pre-commit/[email protected] | |
| with: | |
| node-version: '16' | |
| build: | |
| needs: check-jobs-to-skip | |
| if: ${{ needs.check-jobs-to-skip.outputs.should_skip != 'true'}} || ${{ github.event_name == 'push' }} | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| timeout-minutes: 10 | |
| steps: | |
| - uses: actions/setup-node@v3 | |
| with: | |
| node-version: '16' | |
| - uses: actions/checkout@v3 | |
| - name: Set up Conda Environment | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: "pcmdi_utils_dev" | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| use-mamba: true | |
| mamba-version: "*" | |
| channel-priority: strict | |
| auto-update-conda: true | |
| # Used for refreshing the cache every 24 hours to avoid inconsistencies of package | |
| # versions between the CI pipeline and local installations. | |
| - name: Get Date | |
| id: get-date | |
| run: echo "today=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_OUTPUT | |
| shell: bash | |
| - name: Cache Conda | |
| uses: actions/cache@v3 | |
| with: | |
| node-version: '16' | |
| path: ${{ env.CONDA }}/envs | |
| key: | |
| conda-${{ runner.os }}--${{ runner.arch }}--${{ | |
| steps.get-date.outputs.today }}-${{ | |
| hashFiles('conda-env/dev.yml') }}-${{ env.CACHE_NUMBER}} | |
| env: | |
| # Increase this value to reset cache if conda/dev.yml has not changed in the workflow | |
| CACHE_NUMBER: 0 | |
| - name: Update environment | |
| run: | |
| mamba env update -n pcmdi_utils_dev -f conda-env/dev.yml | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| - name: Install pcmdi_utils | |
| # Source: https://github.com/conda/conda-build/issues/4251#issuecomment-1053460542 | |
| run: | | |
| python -m pip install --no-build-isolation --no-deps -e . | |
| - name: Run Tests | |
| run: | | |
| pytest |