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| <html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Black Sea intermediate-complexity box model · PALEOocean Documentation</title><meta name="title" content="Black Sea intermediate-complexity box model · PALEOocean Documentation"/><meta property="og:title" content="Black Sea intermediate-complexity box model · PALEOocean Documentation"/><meta property="twitter:title" content="Black Sea intermediate-complexity box model · PALEOocean Documentation"/><meta name="description" content="Documentation for PALEOocean Documentation."/><meta property="og:description" content="Documentation for PALEOocean Documentation."/><meta property="twitter:description" content="Documentation for PALEOocean Documentation."/><script data-outdated-warner src="../../../assets/warner.js"></script><link href="https://cdnjs.cloudflare.com/ajax/libs/lato-font/3.0.0/css/lato-font.min.css" rel="stylesheet" type="text/css"/><link 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href="../../../assets/themes/documenter-dark.css" data-theme-name="documenter-dark" data-theme-primary-dark/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../../../assets/themes/documenter-light.css" data-theme-name="documenter-light" data-theme-primary/><script src="../../../assets/themeswap.js"></script></head><body><div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href="../../../">PALEOocean Documentation</a></span></div><button class="docs-search-query input is-rounded is-small is-clickable my-2 mx-auto py-1 px-2" id="documenter-search-query">Search docs (Ctrl + /)</button><ul class="docs-menu"><li><a class="tocitem" href="../../../">PALEOocean.jl documentation</a></li><li><span class="tocitem">Examples and Tutorials</span><ul><li><input class="collapse-toggle" id="menuitem-2-1" type="checkbox"/><label class="tocitem" for="menuitem-2-1"><span class="docs-label">ocean3box</span><i 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fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a><nav class="breadcrumb"><ul class="is-hidden-mobile"><li><a class="is-disabled">Examples and Tutorials</a></li><li><a class="is-disabled">blacksea</a></li><li class="is-active"><a href>Black Sea intermediate-complexity box model</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Black Sea intermediate-complexity box model</a></li></ul></nav><div class="docs-right"><a class="docs-navbar-link" href="https://github.com/PALEOtoolkit/PALEOocean.jl" title="View the repository on GitHub"><span class="docs-icon fa-brands"></span><span class="docs-label is-hidden-touch">GitHub</span></a><a class="docs-navbar-link" href="https://github.com/PALEOtoolkit/PALEOocean.jl/blob/main/docs/src/collated_examples/blacksea/README.md" title="Edit source on GitHub"><span class="docs-icon fa-solid"></span></a><a class="docs-settings-button docs-navbar-link fa-solid fa-gear" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-article-toggle-button fa-solid fa-chevron-up" id="documenter-article-toggle-button" href="javascript:;" title="Collapse all docstrings"></a></div></header><article class="content" id="documenter-page"><h1 id="Black-Sea-intermediate-complexity-box-model"><a class="docs-heading-anchor" href="#Black-Sea-intermediate-complexity-box-model">Black Sea intermediate-complexity box model</a><a id="Black-Sea-intermediate-complexity-box-model-1"></a><a class="docs-heading-anchor-permalink" href="#Black-Sea-intermediate-complexity-box-model" title="Permalink"></a></h1><p>Black sea examples and test cases, using the 1-column model for the Black sea circulation from (<a href="../../../References/#Romaniello2010a">Romaniello and Derry, 2010</a>).</p><h2 id="Installation"><a class="docs-heading-anchor" href="#Installation">Installation</a><a id="Installation-1"></a><a class="docs-heading-anchor-permalink" href="#Installation" title="Permalink"></a></h2><p>These examples use <code>ReactionOceanTransportRomanielloICBM</code> to read Matlab data files with the Black sea circulation from (<a href="../../../References/#Romaniello2010a">Romaniello and Derry, 2010</a>).</p><p>The Matlab datafiles are available as a zip file from <a href="https://github.com/PALEOtoolkit/PALEOocean.jl/releases">https://github.com/PALEOtoolkit/PALEOocean.jl/releases</a>, generated from the Matlab model code available as Supplementary Information to (<a href="../../../References/#Romaniello2010">Romaniello and Derry, 2010</a>).</p><p>The examples assume the zip file has been downloaded and unpacked to subfolder <code>../romglb/romaniello2010_transport</code> (NB: a subfolder of <code>romglb</code>, not this folder <code>blacksea</code>, as the zip file contains both global and Black sea data files)</p><h2 id="O2-only-air-sea-exchange-and-transport-test"><a class="docs-heading-anchor" href="#O2-only-air-sea-exchange-and-transport-test">O2 only air-sea exchange and transport test</a><a id="O2-only-air-sea-exchange-and-transport-test-1"></a><a class="docs-heading-anchor-permalink" href="#O2-only-air-sea-exchange-and-transport-test" title="Permalink"></a></h2><pre><code class="nohighlight hljs">include("PALEO_examples_blacksea_O2_only.jl")</code></pre><h2 id="P,-O2-with-parameterized-export-production"><a class="docs-heading-anchor" href="#P,-O2-with-parameterized-export-production">P, O2 with parameterized export production</a><a id="P,-O2-with-parameterized-export-production-1"></a><a class="docs-heading-anchor-permalink" href="#P,-O2-with-parameterized-export-production" title="Permalink"></a></h2><pre><code class="nohighlight hljs">include("PALEO_examples_blacksea_P_O2.jl")</code></pre><p>Phosphorus and oxygen, with a parameterization of export production based on light and nutrient availability.</p><p>Configured to create a closed circulation by returning Bosphorus outflow back to surface box, and sourcing Bosphorus inflow from surface box.</p><p>No burial fluxes (ie oceanfloor phosphorus flux is recycled into water column), so the Black sea is effectively a closed system for phosphorus.</p><h2 id="P,-O2,-S-with-parameterized-export-production"><a class="docs-heading-anchor" href="#P,-O2,-S-with-parameterized-export-production">P, O2, S with parameterized export production</a><a id="P,-O2,-S-with-parameterized-export-production-1"></a><a class="docs-heading-anchor-permalink" href="#P,-O2,-S-with-parameterized-export-production" title="Permalink"></a></h2><pre><code class="nohighlight hljs">include("PALEO_examples_blacksea_P_O2_SO4.jl")</code></pre><p>Phosphorus, oxygen, sulphur, with a parameterization of export production based on light and nutrient availability.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../shelf1D/README/">« 1D shelf sea examples and test cases</a><a class="docs-footer-nextpage" href="../../romglb/README/">Intermediate-complexity global ocean »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.4.1 on <span class="colophon-date" title="Tuesday 18 June 2024 11:05">Tuesday 18 June 2024</span>. 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