feat(abr-testing): ABR protocols and Liquid Set Ups (#16728)

<!--
Thanks for taking the time to open a Pull Request (PR)! Please make sure
you've read the "Opening Pull Requests" section of our Contributing
Guide:


https://github.com/Opentrons/opentrons/blob/edge/CONTRIBUTING.md#opening-pull-requests

GitHub provides robust markdown to format your PR. Links, diagrams,
pictures, and videos along with text formatting make it possible to
create a rich and informative PR. For more information on GitHub
markdown, see:


https://docs.github.com/en/get-started/writing-on-github/getting-started-with-writing-and-formatting-on-github/basic-writing-and-formatting-syntax

To ensure your code is reviewed quickly and thoroughly, please fill out
the sections below to the best of your ability!
-->

# Overview

Current ABR Protocols and Liquid Set Ups

## Test Plan and Hands on Testing

All protocols have been simulated and ran on ABR robots successfully.

## Changelog

- Protocols include helper functions to load commonly used parameters,
module/adapter/labware set ups, loading liquids, probing liquids,
measuring height of loaded liquids
- Protocols follow format and linting rules, excluding flake8 complexity
score.

## Review requests

<!--
- What do you need from reviewers to feel confident this PR is ready to
merge?
- Ask questions.
-->

## Risk assessment

- Protocols will no longer be able to be analyzed on the app, but will
work on the robot as long as the `abr-testing` folder is pushed to it.
However, protocols will still be analyzed using the abr `make simulate`
command.

---------

Co-authored-by: Seth Foster <[email protected]>

.eslintignore

@@ -28,6 +28,9 @@ robot-server/**
 shared-data/python/**
 hardware-testing/**
 
+# abr-testing don't format the json protocols
+abr-testing/protocols/**
+
 # analyses-snapshot-testing don't format the json protocols
 analyses-snapshot-testing/files
 # don't format the snapshots

Makefile

@@ -228,7 +228,7 @@ lint-js-prettier:
 
 .PHONY: lint-json
 lint-json:
-	yarn eslint --max-warnings 0 --ext .json .
+	yarn eslint --ignore-pattern "abr-testing/protocols/" --max-warnings 0 --ext .json .
 
 .PHONY: lint-css
 lint-css:

abr-testing/.flake8

@@ -21,4 +21,5 @@ docstring-convention = google
 
 noqa-require-code = true
 
-# per-file-ignores =
+per-file-ignores =
+    abr_testing/protocols/*: C901

abr-testing/Pipfile

@@ -19,6 +19,7 @@ slack-sdk = "*"
 pandas = "*"
 pandas-stubs = "*"
 paramiko = "*"
+prettier = "*"
 
 [dev-packages]
 atomicwrites = "==1.4.1"

abr-testing/abr_testing/protocol_simulation/abr_sim_check.py

@@ -21,7 +21,7 @@ def run(file_to_simulate: Path) -> None:
 
     exclude = [
         "__init__.py",
-        "shared_vars_and_funcs.py",
+        "helpers.py",
     ]
     # Walk through the root directory and its subdirectories
     for root, dirs, files in os.walk(root_dir):

abr-testing/abr_testing/protocols/__init__.py

@@ -0,0 +1 @@
+"""protocols."""