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Cli protocol settings via yaml input#770

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richardjgowers wants to merge 10 commits intomainOpenFreeEnergy/openfe:mainfrom cli_protocol_settingsOpenFreeEnergy/openfe:cli_protocol_settingsCopy head branch name to clipboard

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Commits on Mar 11, 2024

• cli: expand yaml settings to enable protocol settings

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  richardjgowers

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  af0fb98

• cli: better handle optional-ness of Protocol in yaml

  richardjgowers

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  0fe4b1d

• cli: use yaml specified Protocol in plan-rbfe-network

  richardjgowers

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  f8e9756

• silences warning in plan_radial_network when int passed

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  richardjgowers

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  a05b1c8

• cli: hook custom Protocol via yaml into plan-rhfe command

  richardjgowers

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  8f6dd90

• cli: test coverage for yaml options

  richardjgowers

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  0d3f53d

• cli: finishing test coverage for yaml input

  richardjgowers

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  fccd499

• cli: docs: add docs on settings input in yaml

  richardjgowers

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  3c2fd1a

• cli: update tests following rename of Protocol name

  richardjgowers

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  422970b

• cli: docs: move docs on customising protocols

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  richardjgowers

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  8df0b05