Move all .gitignore into single file at top of repo

.gitignore

@@ -1,4 +1,91 @@
-/apps/*/vendor/bundle
+# See http://help.github.com/ignore-files/ for more about ignoring files.
+#
+# If you find yourself ignoring temporary files generated by your text editor
+# or operating system, you probably want to add a global ignore instead:
+#   git config --global core.excludesfile '~/.gitignore_global'
+
+# Ignore bundler config.
+/apps/*/.bundle
+/apps/*/vendor/bundle/
+
+# files used for deployment should not be versioned
+/apps/*/.htaccess
+/apps/*/public/.htaccess
+
+# Ignore the default SQLite database.
+/apps/*/db/*.sqlite3
+/apps/*/db/*.sqlite3-journal
+
+# Ignore all logfiles and tempfiles.
+/apps/*/log/*.log
+/apps/*/tmp/*
+!/apps/*/tmp/.keep
+# data to store simulations and file uploads for development
+/apps/*/data
+/apps/myjobs/templates
+
+# awesim-rails uses separately versioned wiki repositories
+# do not include those in the app repo
+/apps/myjobs/docs
+
+# files used for deployment should not be versioned
+/apps/*/public/assets/
+/apps/*/public/.htaccess
+/apps/*/.env.production.local
+/apps/*/.env.local*
+/apps/activejobs/config/initializers/filter.rb
+/apps/dashboard/config/initializers/ood.rb
+
+/apps/bc_desktop/local
+
+# Ignore staged app
+/apps/dashboard/vendor/my_app
+
+/apps/dashboard/config/clusters.d
+
+# SSHFS
+._*
+
+.DS_Store
+
+# Don't include the node modules
 /apps/*/node_modules
+
+# Build artifacts
 /apps/*/.built
 /packaging/*.tar.gz
+
+lib-cov
+*.seed
+*.log
+*.csv
+*.dat
+*.out
+*.pid
+*.gz
+npm-debug.log
+
+/apps/shell/pids
+/apps/shell/results
+
+######################################################################
+#
+# Ignore Vim files
+# https://github.com/github/gitignore/blob/master/Global/Vim.gitignore
+#
+######################################################################
+
+# Swap
+[._]*.s[a-v][a-z]
+[._]*.sw[a-p]
+[._]s[a-v][a-z]
+[._]sw[a-p]
+
+# Session
+Session.vim
+
+# Temporary
+.netrwhist
+*~
+# Auto-generated tag files
+tags