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Fix gh action

Fix gh action #6

name: (Without Mongo) Unit, integration, and notebook tests
on:
push:
schedule:
- cron: '0 12 * * *' # Runs every day at 12 PM UTC (7 AM EST)
jobs:
build:
runs-on: ubuntu-latest
env:
MONGO_ENABLED: false
timeout-minutes: 40
if: "!contains(github.event.head_commit.message, 'CI Bot')"
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 1
- name: Set up Python 3.10
uses: actions/setup-python@v5
with:
python-version: "3.10"
cache: "pip"
- name: Show OS Info
run: '[[ "$OSTYPE" == "linux-gnu"* ]] && { echo "OS Type: Linux"; (command -v lsb_release &> /dev/null && lsb_release -a) || cat /etc/os-release; uname -r; } || [[ "$OSTYPE" == "darwin"* ]] && { echo "OS Type: macOS"; sw_vers; uname -r; } || echo "Unsupported OS type: $OSTYPE"'
- name: Start docker compose with redis
run: make services
- name: Upgrade pip
run: python -m pip install --upgrade pip
- name: Install default dependencies and run simple test
run: |
pip install .
python examples/simple_instrumented_script.py | tee output.log
cat output.log
grep -q "ERROR" output.log && exit 1
rm output.log
- name: Install Dask dependencies alone and run a simple Dask test
run: |
pip uninstall flowcept -y
pip install .[dask]
python examples/dask_example.py | tee output.log
cat output.log
grep -q "ERROR" output.log && exit 1
rm output.log
- name: Install MLFlow dependencies alone and run a simple MLFlow test
run: |
pip uninstall flowcept -y
pip install .[mlflow]
python examples/mlflow_example.py | tee output.log
cat output.log
grep -q "ERROR" output.log && exit 1
rm output.log
- name: Install Tensorboard dependencies alone and run a simple Tensorboard test
run: |
pip uninstall flowcept -y
pip install .[tensorboard]
python examples/tensorboard_example.py | tee output.log
cat output.log
grep -q "ERROR" output.log && exit 1
rm output.log
- name: Install all dependencies
run: |
python -m pip install --upgrade pip
python -m pip install .[all]
python -m pip install .[ml_dev]
- name: List installed packages
run: pip list
- name: Test with pytest and redis
run: |
make tests
- name: Test notebooks with pytest and redis
run: pytest --nbmake "notebooks/" --nbmake-timeout=600 --ignore="notebooks/dask_from_CLI.ipynb" --ignore="notebooks/analytics.ipynb"
- name: Shut down docker compose
run: make services-stop
- name: Clean up
run: |
make clean
find /home/runner/runners/ -type f -name "*.log" -exec sh -c 'echo {}; >"{}"' \;