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Merge pull request #23 from karinlag/master
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Getting the permission stuff correct.
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karinlag authored Dec 5, 2018
2 parents 19cc177 + 9ae7917 commit 29ac375
Showing 1 changed file with 0 additions and 2 deletions.
2 changes: 0 additions & 2 deletions run_track.sh
Original file line number Diff line number Diff line change
Expand Up @@ -20,8 +20,6 @@ cp ${template} ${out_directory}/config_files
cp ${script_directory}/conf/${profile}.config ${out_directory}/config_files

nextflow -c ${template} run -resume ${script_directory}/${track_script} -profile ${profile} --out_dir=${out_directory}
chmod -R 664 ${out_directory}
chmod -R a+X ${out_directory}
# spades sometimes gets weird permissions. Doing this to help removal
chmod -R 755 work 2> /dev/null
chmod -R -x+X work 2> /dev/null

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