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Update deprecations#2011

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stephprince merged 24 commits intorelease-3.0.0NeurodataWithoutBorders/pynwb:release-3.0.0from deprecation-errorsNeurodataWithoutBorders/pynwb:deprecation-errorsCopy head branch name to clipboardDec 23, 2024

+560-629

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Commits on Dec 17, 2024

• update deprecated classes and methods

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Commits on Dec 18, 2024

• update deprecation warnings

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• update tests for deprecated classes and functions

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• fix warnings and formatting

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• add scratch tests and deprecations

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• keep function behavior for deprecation warnings

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• update CHANGELOG.md

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• add tests for deprecations

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• update scratch tutorial

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• skip deprecated gallery examples

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Commits on Dec 19, 2024

• Merge branch 'dev' into deprecation-errors

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Commits on Dec 21, 2024

• Merge branch 'dev' into deprecation-errors

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• update CHANGELOG.md

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• remove old icephys tutorial

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• add pynwb 4.0 deprecation info

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• add error on new pass on construct method

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• remove warnings on construct for deprecations

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Commits on Dec 22, 2024

• fix formatting

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• update hdmf-zarr url

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Commits on Dec 23, 2024

• Apply suggestions from code review

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• Update src/pynwb/core.py

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• add code review suggestions

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• add catch for extra warning

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• remove unused variable

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