[Draft] Refactor input and output of wrapper #77
Workflow file for this run
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| name: UIPS-CI | |
| on: | |
| push: | |
| branches: [main] | |
| paths-ignore: | |
| - '*.md' | |
| - 'README*' | |
| - 'LICENSE' | |
| - 'documentation/readmeImages/*' | |
| pull_request: | |
| branches: [main] | |
| paths-ignore: | |
| - '*.md' | |
| - 'README*' | |
| - 'LICENSE' | |
| - 'documentation/readmeImages/*' | |
| jobs: | |
| Lint: | |
| name: Lint (${{ matrix.python-version }}, ${{ matrix.os }}) | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.10'] | |
| os: ['ubuntu-latest'] | |
| defaults: | |
| run: | |
| working-directory: ${{github.workspace}} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{matrix.python-version}} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install black | |
| pip install isort | |
| pip install codespell | |
| - name: Formatting | |
| run: | | |
| source .github/linters/formatting.sh | |
| format . true | |
| Test: | |
| name: Test (${{ matrix.python-version }}, ${{ matrix.mpi }}, ${{ matrix.os }}) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.10','3.11','3.12'] | |
| os: ['ubuntu-latest'] | |
| mpi: ['openmpi'] | |
| defaults: | |
| run: | |
| working-directory: ${{github.workspace}} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Setup Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{matrix.python-version}} | |
| - name: Setup MPI | |
| uses: mpi4py/setup-mpi@v1 | |
| with: | |
| mpi: ${{matrix.mpi}} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install . | |
| pip install pytest | |
| - name: Pytests | |
| run: | | |
| python -m pytest tests -v --disable-warnings | |
| - name: Parallel test | |
| run: | | |
| cd tests | |
| mpiexec -np 2 python main_from_input.py -i ../uips/inputs/input_test |