Merge pull request #21 from NREL/spell

Spelling checks

.codespell-ignore-words

@@ -0,0 +1,3 @@
+nd
+inh
+lastR

.codespellrc

@@ -0,0 +1,3 @@
+[codespell]
+skip = .git,OFsolvers,build,__pycache__,data_conditional_mean,Figures,assets
+ignore-words = .codespell-ignore-words

.github/linters/formatting.sh

@@ -11,7 +11,8 @@ format () {
 
         black --line-length 79 --target-version 'py310' --include  '\.pyi?$' $1
         isort --profile 'black' --multi-line 3 --trailing-comma --force-grid-wrap 0 --line-length 79 --use-parentheses $1
-    fi; 
+    fi;
+    codespell $1 
 }
 
 

README.md

@@ -29,7 +29,7 @@ python applications/write_stir_tank_mesh.py -i $inp -o $out
 
 Generates a blockMeshDict
 
-Then activate openFoam environement (tested with OpenFoam9) and mesh with
+Then activate openFoam environment (tested with OpenFoam9) and mesh with
 
 ```bash
 blockMesh -dict system/blockMeshDict
@@ -73,7 +73,7 @@ optional arguments:
 
 ```
 
-### Block cyclindrical meshing
+### Block cylindrical meshing
 
 Generates `blockMeshDict` in `system`
 
@@ -85,7 +85,7 @@ mesh_temp=bird/meshing/block_cyl_mesh_templates/sideSparger
 python applications/write_block_cyl_mesh.py -i $mesh_temp/input.json -t $mesh_temp/topology.json -o $caseFolder/system
 ```
 
-Then activate openFoam environement (tested with OpenFoam9) and mesh with
+Then activate openFoam environment (tested with OpenFoam9) and mesh with
 
 ```bash
 cd $caseFolder

bird/meshing/_mesh_tools.py

@@ -351,12 +351,12 @@ def radialCoarsening(
     #            "ERROR: cannot smooth radial transition without grading list"
     #        )
 
-    #    Length = R[lastR] - R[lastR - 1]
-    #    deltaE = ((R[lastR - 1] - R[lastR - 2])) / NR[lastR - 1]
-    #    gradR[lastR] = 1 / (
-    #        bissection(Length / deltaE, stretch_fun, NR[lastR])
+    #    Length = R[last_R] - R[last_R - 1]
+    #    deltaE = ((R[last_R - 1] - R[last_R - 2])) / NR[last_R - 1]
+    #    gradR[last_R] = 1 / (
+    #        bissection(Length / deltaE, stretch_fun, NR[last_R])
     #    )
-    #    if (gradR[lastR] > 2 or gradR[lastR] < 0.5) and abs(
+    #    if (gradR[last_R] > 2 or gradR[last_R] < 0.5) and abs(
     #        ratio - 1
     #    ) <= 1e-12:
     #        print(