Updated contents at 20241022-104019

2410-canvas/home_info.html

@@ -182,8 +182,8 @@
 <p><br></p>
 <div id="location" class="section level2">
 <h2>Location</h2>
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+<div id="htmlwidget-807b1820829604d81a8d" style="width:100%;height:480px;" class="combineWidgets html-widget"></div>
+<script type="application/json" data-for="htmlwidget-807b1820829604d81a8d">{"x":{"data":["Uppsala","Lund",{"options":{"crs":{"crsClass":"L.CRS.EPSG3857","code":null,"proj4def":null,"projectedBounds":null,"options":{}}},"calls":[{"method":"addTiles","args":["http://{s}.tile.openstreetmap.org/{z}/{x}/{y}.png",null,null,{"minZoom":0,"maxZoom":18,"tileSize":256,"subdomains":"abc","errorTileUrl":"","tms":false,"noWrap":false,"zoomOffset":0,"zoomReverse":false,"opacity":1,"zIndex":1,"detectRetina":false}]},{"method":"addMarkers","args":[59.8511535,17.6310231,null,null,null,{"interactive":true,"draggable":false,"keyboard":true,"title":"","alt":"","zIndexOffset":0,"opacity":1,"riseOnHover":false,"riseOffset":250},"<b>Blåsenhus<\/b><br>Laborativa lärosalen room 10:203<br>Entrance von Kraemers allé 1a<br> Uppsala University<br>75237 Uppsala<br>Sweden",null,null,null,null,{"interactive":false,"permanent":false,"direction":"auto","opacity":1,"offset":[0,0],"textsize":"10px","textOnly":false,"className":"","sticky":true},null]}],"limits":{"lat":[59.8511535,59.8511535],"lng":[17.6310231,17.6310231]},"setView":[[59.8511535,17.6310231],15,[]]},{"options":{"crs":{"crsClass":"L.CRS.EPSG3857","code":null,"proj4def":null,"projectedBounds":null,"options":{}}},"calls":[{"method":"addTiles","args":["http://{s}.tile.openstreetmap.org/{z}/{x}/{y}.png",null,null,{"minZoom":0,"maxZoom":18,"tileSize":256,"subdomains":"abc","errorTileUrl":"","tms":false,"noWrap":false,"zoomOffset":0,"zoomReverse":false,"opacity":1,"zIndex":1,"detectRetina":false}]},{"method":"addMarkers","args":[55.713394,13.206628,null,null,null,{"interactive":true,"draggable":false,"keyboard":true,"title":"","alt":"","zIndexOffset":0,"opacity":1,"riseOnHover":false,"riseOffset":250},"<b>Department of Biology<\/b><br>Building D<br> Room Retina D227<br> Sölvegatan 35<br>Lund Sweden",null,null,null,null,{"interactive":false,"permanent":false,"direction":"auto","opacity":1,"offset":[0,0],"textsize":"10px","textOnly":false,"className":"","sticky":true},null]}],"limits":{"lat":[55.713394,55.713394],"lng":[13.206628,13.206628]},"setView":[[55.713394,13.206628],15,[]]}],"widgetType":["html","html","leaflet","leaflet"],"elementId":["widget599623712","widget853453352","widget226938661","widget605964140"],"html":"<div class=\"cw-container\"><div class=\"cw-subcontainer\"><div class=\"cw-content cw-by-row\"><div class=\"cw-row cw-by-row\" style=\"flex:1;-webkit-flex:1\"><div class=\"cw-col\" style=\"flex:1;-webkit-flex:1\">\n              <div id=\"widget599623712\" class=\" cw-widget html-widget-static-bound\" style=\"width:100%;height:100%\"><\/div>\n              <\/div><div class=\"cw-col\" style=\"flex:1;-webkit-flex:1\">\n              <div id=\"widget853453352\" class=\" cw-widget html-widget-static-bound\" style=\"width:100%;height:100%\"><\/div>\n              <\/div><\/div><div class=\"cw-row cw-by-row\" style=\"flex:20;-webkit-flex:20\"><div class=\"cw-col\" style=\"flex:1;-webkit-flex:1\">\n              <div id=\"widget226938661\" class=\"leaflet cw-widget html-widget-static-bound\" style=\"width:100%;height:100%\"><\/div>\n              <\/div><div class=\"cw-col\" style=\"flex:1;-webkit-flex:1\">\n              <div id=\"widget605964140\" class=\"leaflet cw-widget html-widget-static-bound\" style=\"width:100%;height:100%\"><\/div>\n              <\/div><\/div><\/div><\/div><\/div>","hasCrosstalkInputs":false},"evals":[],"jsHooks":[]}</script>
 </div>
 <div id="travel-info-to-uppsala" class="section level2">
 <h2>Travel info to Uppsala</h2>

2410-canvas/home_precourse.html

@@ -192,10 +192,19 @@ <h3>Tools</h3>
 <p>  <strong>Install <a href="https://rstudio.com/products/rstudio/download/#download" target="_blank">RStudio</a></strong>. Choose based on your OS.</p>
 <p><a href="https://rstudio.com/products/rstudio/download/#download" target="_blank"><img src="data/common/rstudio.png" /></a></p>
 <p>RStudio provides you with tools like code editor with highlighting, project management, version control, package building, debugger, profiler and more. Start up RStudio to check that everything has been installed correctly. If not, contact us and we can help you out.</p>
+<p>You can also watch <a href="https://youtu.be/suX6nsSUXDw?si=FbaiaCpRNvtjxt5N" target="_blank">this video</a> for an introduction to using RStudio</p>
 <p>  <strong>Install R packages</strong></p>
-<p>Extra R packages used in the workshop exercises (if any) are listed below. It is recommended that you install this in advance. Simply copy and paste the code into R.</p>
-<pre class="r"><code># install from cran
-install.packages(c(&#39;rmarkdown&#39;,&#39;fontawesome&#39;,&#39;bookdown&#39;,&#39;htmltools&#39;,&#39;knitr&#39;,&#39;leaflet&#39;,&#39;yaml&#39;,&#39;stringr&#39;,&#39;renv&#39;,&#39;dplyr&#39;,&#39;lubridate&#39;,&#39;formattable&#39;,&#39;kableExtra&#39;,&#39;tidyr&#39;,&#39;ggplot2&#39;,&#39;readxl&#39;,&#39;nycflights13&#39;,&#39;xaringan&#39;,&#39;vioplot&#39;,&#39;vcd&#39;,&#39;patchwork&#39;,&#39;tibble&#39;,&#39;XLConnect&#39;,&#39;markdown&#39;,&#39;magrittr&#39;,&#39;tidyverse&#39;))</code></pre>
+<p>Please download this <a href="../test_installation.Rmd" target="_blank">test_installation.Rmd file</a> and Knit/Render it by clicking on the knit/render icon on the upper right of R Studio or by navigating to file &gt; knit document.<br />
+After rendering if everything goes well you should see this message towards end of the rendered html file:</p>
+<ul>
+<li><strong>Congratulations you have installed all the packages</strong>.</li>
+</ul>
+<p>If there are any missing packages they will be printed at the end of the rendered html file.</p>
+<video width="640" height="480" controls>
+<source src="../Test_Installation.mov" type="video/mp4">
+<p>Your browser does not support the video tag.
+</video></p>
+<!-- Extra R packages used in the workshop exercises (if any) are listed below. It is recommended that you install this in advance. Simply copy and paste the code into R. -->
 <p>  <strong>Install Docker</strong></p>
 <p>It is NOT absolutely necessary to have Docker installed, but we are working on shipping the working course as a Docker container ready to run. In order to be able to use this functionality, please make sure you have <a href="https://www.docker.com/get-started" target="_blank">Docker Desktop</a> installed and running on your machine.</p>
 <p>  <strong>Install git</strong></p>

2410-canvas/index.html

@@ -201,7 +201,7 @@ <h1>R Programming Foundations for Data Analysis</h1>
 <hr />
 <div class="landing-update">
 <p class="small" style="color:#bdbdbd;">
-Last updated on <svg aria-hidden="true" role="img" viewBox="0 0 448 512" style="height:1em;width:0.88em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:#bdbdbd;overflow:visible;position:relative;"><path d="M152 24c0-13.3-10.7-24-24-24s-24 10.7-24 24V64H64C28.7 64 0 92.7 0 128v16 48V448c0 35.3 28.7 64 64 64H384c35.3 0 64-28.7 64-64V192 144 128c0-35.3-28.7-64-64-64H344V24c0-13.3-10.7-24-24-24s-24 10.7-24 24V64H152V24zM48 192h80v56H48V192zm0 104h80v64H48V296zm128 0h96v64H176V296zm144 0h80v64H320V296zm80-48H320V192h80v56zm0 160v40c0 8.8-7.2 16-16 16H320V408h80zm-128 0v56H176V408h96zm-144 0v56H64c-8.8 0-16-7.2-16-16V408h80zM272 248H176V192h96v56z"/></svg> 22-Oct-2024 at <svg aria-hidden="true" role="img" viewBox="0 0 512 512" style="height:1em;width:1em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:#bdbdbd;overflow:visible;position:relative;"><path d="M464 256A208 208 0 1 1 48 256a208 208 0 1 1 416 0zM0 256a256 256 0 1 0 512 0A256 256 0 1 0 0 256zM232 120V256c0 8 4 15.5 10.7 20l96 64c11 7.4 25.9 4.4 33.3-6.7s4.4-25.9-6.7-33.3L280 243.2V120c0-13.3-10.7-24-24-24s-24 10.7-24 24z"/></svg> 08:23:23 AM .
+Last updated on <svg aria-hidden="true" role="img" viewBox="0 0 448 512" style="height:1em;width:0.88em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:#bdbdbd;overflow:visible;position:relative;"><path d="M152 24c0-13.3-10.7-24-24-24s-24 10.7-24 24V64H64C28.7 64 0 92.7 0 128v16 48V448c0 35.3 28.7 64 64 64H384c35.3 0 64-28.7 64-64V192 144 128c0-35.3-28.7-64-64-64H344V24c0-13.3-10.7-24-24-24s-24 10.7-24 24V64H152V24zM48 192h80v56H48V192zm0 104h80v64H48V296zm128 0h96v64H176V296zm144 0h80v64H320V296zm80-48H320V192h80v56zm0 160v40c0 8.8-7.2 16-16 16H320V408h80zm-128 0v56H176V408h96zm-144 0v56H64c-8.8 0-16-7.2-16-16V408h80zM272 248H176V192h96v56z"/></svg> 22-Oct-2024 at <svg aria-hidden="true" role="img" viewBox="0 0 512 512" style="height:1em;width:1em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:#bdbdbd;overflow:visible;position:relative;"><path d="M464 256A208 208 0 1 1 48 256a208 208 0 1 1 416 0zM0 256a256 256 0 1 0 512 0A256 256 0 1 0 0 256zM232 120V256c0 8 4 15.5 10.7 20l96 64c11 7.4 25.9 4.4 33.3-6.7s4.4-25.9-6.7-33.3L280 243.2V120c0-13.3-10.7-24-24-24s-24 10.7-24 24z"/></svg> 08:39:04 AM .
 </p>
 </div>
 </div>