Merge branch 'gaas2' of https://github.com/NBISweden/GAAS into gaas2

README.md

@@ -61,16 +61,16 @@ The repository contains mainly tools and knowledge related to bioinformatics and
 
     * Install perl modules with cpanm
     ```
-    cpanm bioperl
-    cpanm Clone
-    cpanm Graph::Directed
-    cpanm LWP::UserAgent
-    cpanm Statistics::R
-    cpanm Sort::Naturally
-    cpanm File::Share
-    cpanm Moose
-    cpanm File::ShareDir::Install
-    cpanm Bio::DB::EUtilities
+    cpanm install bioperl
+    cpanm install Clone
+    cpanm install Graph::Directed
+    cpanm install LWP::UserAgent
+    cpanm install Statistics::R
+    cpanm install Sort::Naturally
+    cpanm install File::Share
+    cpanm install Moose
+    cpanm install File::ShareDir::Install
+    cpanm install Bio::DB::EUtilities
     ```
     * Install perl modules with conda
 

annotation/README.md

@@ -10,7 +10,7 @@
 #### [lsf_templates](lsf_templates)
 It contains batch scripts to launch different job on lsf scheduler.
 
-#### [Tools](Tools)
+#### [tools](tools)
 The most important. All convenient tools.  
 [>>All the scripts are gathered here<<](../bin/)