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EMBLmyGFF3-1.1
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@Juke34 Juke34 released this 22 Nov 15:33
· 200 commits to master since this release
v1.1
503f69e

change log:

  • add of the extra line "AC * _Contig"
  • DE line is no more filled by the 1 row of the gff3. XXX instead
  • Locus tag in sequential order for the whole genome (Before it was restarting to 1 for each sequence)
  • Separate the locus_tag information from the accession information => New locus_tag parameter added.
  • Use of taxid allowed in the species parameter (Will be translated to the species name).
  • Fill automatically the classification parameter fetch from the NCBI taxonomy DB
  • Add "email" parameter that will be use to fetch information from NCBI
  • Ambiguous DNA handled now for translation
  • Last character removed if stop (*) when "translation" parameter activated. Add a warning if premature codon stop.
  • Value "UNKNOWN" replaced by "XXX"
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