For details and step-by-step guide watch the youtube video: Interactive Application Deployment for Intune with PSADT

This is a modified PSADT to get you started with an interactive application installation. By default it prompts end-user to close Microsoft Excel and Word if they are open before the installation can continue.
To use it, download the repository, replace your setup file with the "setup.exe" in the "Files" folder.
Edit the "AppDeployToolkitConfig.xml" in the "AppDeployToolkit" folder for logging of the app installation.
The line you need to edit is in the XML file is:

<Toolkit_LogPath>$envProgramData\DemoLog\Win32</Toolkit_LogPath>
<-- Log path used for Toolkit logging. Change the above ^ path to your desired Win32 app installation log -->

Use the Microsoft Win32 Content Prep Tool to create .intunewin from the toolkit.
Upload the .intunewin file to Intune and you are ready to installation the application on the endpoints.