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Refactor llm i #353

Merged
merged 4 commits into from
Nov 8, 2024
Merged

Refactor llm i #353

merged 4 commits into from
Nov 8, 2024

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mschwoer
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Note that this is not the final state in terms of UI/UX, but just a step towards fully integrating LLM.

  • reduce code duplication for LLM part by reusing the information generated in Analysis.
  • simplify logic on LLM page
  • remove some keys from session state

volcano_plot._annotate_result_df()
volcano_plot._plot()
genes_of_interest_colored = volcano_plot.get_colored_labels()
# TODO move this to volcano anyway ?
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These should ideally be functions of all analyses. To get a list of all significant proteins and be able to look them up on uniprot.

Base automatically changed from simplify_analysis-III to development November 8, 2024 16:34
@mschwoer mschwoer merged commit 9c9e89a into development Nov 8, 2024
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@mschwoer mschwoer deleted the refactor_llm_I branch November 8, 2024 16:34
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2 participants