manual fixes for rule F

MannLabs · Oct 18, 2024 · ed26e48 · ed26e48
1 parent d0de8a9
commit ed26e48
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Showing 5 changed files with 12 additions and 12 deletions.
diff --git a/alphastats/__init__.py b/alphastats/__init__.py
@@ -40,11 +40,11 @@
 }
 
 # TODO get rid of these imports
-import alphastats.gui
+import alphastats.gui  # noqa: F401
 
-from .cli import *
-from .loader.AlphaPeptLoader import *
-from .loader.DIANNLoader import *
-from .loader.FragPipeLoader import *
-from .loader.MaxQuantLoader import *
-from .loader.SpectronautLoader import *
+from .cli import *  # noqa: F403
+from .loader.AlphaPeptLoader import *  # noqa: F403
+from .loader.DIANNLoader import *  # noqa: F403
+from .loader.FragPipeLoader import *  # noqa: F403
+from .loader.MaxQuantLoader import *  # noqa: F403
+from .loader.SpectronautLoader import *  # noqa: F403
diff --git a/alphastats/gui/__init__.py b/alphastats/gui/__init__.py
@@ -1 +1 @@
-from .gui import run
+from .gui import run  # noqa: F401 TODO: check if necessary
diff --git a/alphastats/load_data.py b/alphastats/load_data.py
@@ -1,10 +1,10 @@
+from alphastats import MaxQuantLoader
 from alphastats.loader.AlphaPeptLoader import AlphaPeptLoader
 from alphastats.loader.DIANNLoader import DIANNLoader
 from alphastats.loader.FragPipeLoader import FragPipeLoader
-from alphastats.loader.MaxQuantLoader import *
 
 
-# TODO: Currenlty only used by tests, but should maybe be used more widely
+# TODO: Currently only used by tests, but should maybe be used more widely
 def load_data(file, type, **kwargs):
     type = type.lower()
     if type == "maxquant":

diff --git a/pyproject.toml b/pyproject.toml
@@ -6,7 +6,7 @@ extend-exclude = [".bumpversion.cfg", ".secrets.baseline"]
 #    # pycodestyle
 #    "E",
 #    # Pyflakes
-#    "F",
+    "F",
     # pyupgrade
     "UP",
 #    # flake8-bugbear

diff --git a/release/pyinstaller/alphastats_pyinstaller.py b/release/pyinstaller/alphastats_pyinstaller.py
@@ -2,7 +2,7 @@
     try:
         import multiprocessing
 
-        import alphastats
+        import alphastats  # noqa: F401 TODO check if this can be removed
 
         multiprocessing.freeze_support()
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		from .gui import run
		from .gui import run # noqa: F401 TODO: check if necessary