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Add CDG advection scheme #1469

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Add CDG advection scheme #1469

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Full CDG code as branched from ocean/develop before FCT operator split merge for compatibility between advection schemes

  • verified with idealized and global ocean test cases
  • see submitted paper at: https://arxiv.org/pdf/1711.04928.pdf
  • adding Andrew Bradley's SIQK c++ polygon intersection code to operators/ (in framework) and linking to c++ library in top level Makefile
  • package and control parameter calls added to core_interface and forward_mode routines
  • adding Bill Lipscombs projection operators to operators (in framework)
  • reverted removal of vertical monotonicity limiting in the FCT transport code

David Robert Lee and others added 3 commits December 11, 2017 14:31
1) using cdg pool version of the vertex velocities
b1203a5 
2) getting wachspress areaB from the mesh Pool
merging the following changes cherry picked from the ocean/light_part…
c42451d 
…icle_reorg branch

1) deleting lagrangian particles version of the wachspress initialzation routine
2) moving wachspressAreaB array to the ocean/shared/Registry
3) deleting the particles Pool and reverting the contents back to the lagrangian particles pools
cherry picked into the cdg branch
f0b9504 
additional changes to particle pull request to facilitate removal of lagrangian particles scratch pool,
and also adding a meshInterpolation package (on if cdg or light is active)
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