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[FEAT]: BAMF nnUNet Breast MR Model#82

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rahul99 wants to merge 27 commits intoMHubAI:mainMHubAI/models:mainfrom bamf-health:bamf_nnunet_mr_breastbamf-health/mhub-models:bamf_nnunet_mr_breastCopy head branch name to clipboard

+421

Commits

Commits on Jun 6, 2024

• [FEAT]: breast, fgt, and tumor seg module

  

  Rahul Soni

  committed
  cf81190

Commits on Jun 7, 2024

• added meta data and refactored post processor

  

  Rahul Soni

  committed
  b972102

Commits on Jun 12, 2024

• added nnunet v2 runner class

  

  Rahul Soni

  committed
  e4ead8b

Commits on Jun 13, 2024

• updated metadata

  

  Rahul Soni

  committed
  c5fe136

• updated metadata

  

  Rahul Soni

  committed
  07adc87

Commits on Jun 17, 2024

• update nnunet version and refactor env vars

  

  Rahul Soni

  committed
  f48bf52

Commits on Jun 18, 2024

• fix rois

  

  Rahul Soni

  committed
  6dc7a28

• minor description update

  

  Rahul Soni

  committed
  b47061f

Commits on Jul 9, 2024

• custom SegDB keys

  

  Rahul Soni

  committed
  204238f

• custom SegDB keys

  

  Rahul Soni

  committed
  10f587d

Commits on Jul 11, 2024

• custom SegDB module

  

  Rahul Soni

  committed
  c7f2007

Commits on Jul 30, 2024

• move custom segDB triplets to config

  

  Rahul Soni

  committed
  5d7e268

Commits on Aug 12, 2024

• update documentation

  

  Rahul Soni

  committed
  312ae55

Commits on Aug 21, 2024

• minor refactoring for PR-82

  

  Rahul Soni

  committed
  5997cda

• minor refactoring for PR-82

  

  Rahul Soni

  committed
  24d3b6b

• [PR-82] update output classes in meta

  

  Rahul Soni

  committed
  5217425

Commits on Aug 22, 2024

• [PR-82] indicate nnUNetv2 in debug output

  

  Rahul Soni

  committed
  a3a3474

• BREAST+FGT label correction

  

  Rahul Soni

  committed
  e23f9c4

• Switch FGT to SCT scheme designator

  

  Rahul Soni

  committed
  3eb991e

Commits on Aug 23, 2024

• rollback custom SegDB triplet: keys now available in SegDB

  

  Rahul Soni

  committed
  66f8ce8

Commits on Aug 26, 2024

• refactor roi key name

  

  Rahul Soni

  committed
  c04ab11

• refactor model display name

  

  Rahul Soni

  committed
  833aed7

Commits on Aug 28, 2024

• omit context for tissue roi

  

  Rahul Soni

  committed
  f44935d

Commits on Sep 26, 2024

• Add mhub deployment instance

  

  Rahul Soni

  committed
  745ed82

• Add mhub deployment instance v2

  

  Rahul Soni

  committed
  4ae4c9a

Commits on Sep 30, 2024

• update down url

  

  Rahul Soni

  committed
  9bdce2f

Commits on Oct 3, 2024

• add publication in meta.json

  

  Rahul Soni

  committed
  d7e5d04