Skip to content

Commit

Permalink
manually rebuild docs (#70)
Browse files Browse the repository at this point in the history
  • Loading branch information
akeeste authored May 23, 2024
1 parent 6af7e82 commit c8e8bea
Show file tree
Hide file tree
Showing 161 changed files with 1,734 additions and 4,403 deletions.
68 changes: 7 additions & 61 deletions docs/ADCP_Delft3D_TRTS_example.html
Original file line number Diff line number Diff line change
Expand Up @@ -25,9 +25,7 @@
<script defer="defer" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
<script src="_static/js/theme.js"></script>
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
<link rel="next" title="Reading ADV Data with MHKiT" href="adv_example.html" />
<link rel="prev" title="Analyzing ADCP Data with MHKiT" href="adcp_example.html" />
<link rel="search" title="Search" href="search.html" />
</head>

<body class="wy-body-for-nav">
Expand All @@ -52,61 +50,13 @@
</form>
</div>
</div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
<ul class="current">
<ul>
<li class="toctree-l1"><a class="reference internal" href="overview.html">Overview</a></li>
<li class="toctree-l1"><a class="reference internal" href="installation.html">MHKiT-Python Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="matlab_installation.html">MHKiT-MATLAB Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="examples_overview.html">MHKiT Examples</a></li>
<li class="toctree-l1"><a class="reference internal" href="qc.html">QC Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="wave.html">Wave Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="river.html">River Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="tidal.html">Tidal Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="power.html">Power Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="loads.html">Loads Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="dolfyn.html">DOLfYN Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="mooring.html">Mooring Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="utils.html">Utils Module</a></li>
<li class="toctree-l1 current"><a class="reference internal" href="python.html">MHKiT-Python</a><ul class="current">
<li class="toctree-l2"><a class="reference internal" href="python.html#installation">Installation</a></li>
<li class="toctree-l2"><a class="reference internal" href="python.html#api-documentation">API Documentation</a></li>
<li class="toctree-l2 current"><a class="reference internal" href="python.html#examples">Examples</a><ul class="current">
<li class="toctree-l3"><a class="reference internal" href="qc_example.html">MHKiT Quality Control Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="wave_example.html">MHKiT Wave Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="river_example.html">MHKiT River Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="tidal_example.html">MHKiT Tidal Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="power_example.html">MHKiT Power Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="loads_example.html">MHKiT Loads Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="environmental_contours_example.html">MHKiT Environmental Contours</a></li>
<li class="toctree-l3"><a class="reference internal" href="wecsim_example.html">MHKiT WEC-Sim Example</a></li>
<li class="toctree-l3"><a class="reference internal" href="SWAN_example.html">MHKiT SWAN Example</a></li>
<li class="toctree-l3"><a class="reference internal" href="WPTO_hindcast_example.html">MHKiT WPTO Hindcast Example</a></li>
<li class="toctree-l3"><a class="reference internal" href="cdip_example.html">MHKiT CDIP IO</a></li>
<li class="toctree-l3"><a class="reference internal" href="PacWave_resource_characterization_example.html">PacWave Resource Assessment</a></li>
<li class="toctree-l3"><a class="reference internal" href="directional_waves.html">Directional Wave Spectrum from NDBC Buoys</a></li>
<li class="toctree-l3"><a class="reference internal" href="metocean_example.html">MHKiT Metocean Data</a></li>
<li class="toctree-l3"><a class="reference internal" href="metocean_example.html#1.-Request-Continuous-Wind-Data-from-NDBC">1. Request Continuous Wind Data from NDBC</a></li>
<li class="toctree-l3"><a class="reference internal" href="Delft3D_example.html">Delft3D IO Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="tidal_performance_example.html">Tidal Power Performance Analysis</a></li>
<li class="toctree-l3"><a class="reference internal" href="adcp_example.html">Analyzing ADCP Data with MHKiT</a></li>
<li class="toctree-l3 current"><a class="current reference internal" href="#">Comparing Transect Data at the Tanana River Test Site</a><ul>
<li class="toctree-l4"><a class="reference internal" href="#1.-Preparing-the-ADCP-Field-Data">1. Preparing the ADCP Field Data</a></li>
<li class="toctree-l4"><a class="reference internal" href="#3.-Error-Calulations">3. Error Calulations</a></li>
<li class="toctree-l4"><a class="reference internal" href="#4.-Discussion">4. Discussion</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="adv_example.html">Reading ADV Data with MHKiT</a></li>
<li class="toctree-l3"><a class="reference internal" href="extreme_response_MLER_example.html">MLER example</a></li>
<li class="toctree-l3"><a class="reference internal" href="extreme_response_contour_example.html">Extreme Conditions Modeling - Contour Approach</a></li>
<li class="toctree-l3"><a class="reference internal" href="extreme_response_full_sea_state_example.html">Extreme Conditions Modeling - Full Sea State Approach</a></li>
<li class="toctree-l3"><a class="reference internal" href="short_term_extremes_example.html">MHKit Short-term Extreme Loads</a></li>
<li class="toctree-l3"><a class="reference internal" href="mooring_example.html">Mooring Module Example</a></li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="python.html#online-forum">Online Forum</a></li>
<li class="toctree-l2"><a class="reference internal" href="python.html#software-tests">Software Tests</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="matlab.html">MHKiT-MATLAB</a></li>
<li class="toctree-l1"><a class="reference internal" href="module.html">Module Overview</a></li>
<li class="toctree-l1"><a class="reference internal" href="examples.html">Examples</a></li>
<li class="toctree-l1"><a class="reference internal" href="api.html">API Documentation</a></li>
<li class="toctree-l1"><a class="reference internal" href="troubleshooting.html">Troubleshooting</a></li>
<li class="toctree-l1"><a class="reference internal" href="terminology.html">Terminology</a></li>
<li class="toctree-l1"><a class="reference internal" href="webinars.html">Webinars</a></li>
Expand All @@ -130,7 +80,6 @@
<div role="navigation" aria-label="Page navigation">
<ul class="wy-breadcrumbs">
<li><a href="index.html" class="icon icon-home" aria-label="Home"></a></li>
<li class="breadcrumb-item"><a href="python.html">MHKiT-Python</a></li>
<li class="breadcrumb-item active">Comparing Transect Data at the Tanana River Test Site</li>
<li class="wy-breadcrumbs-aside">
<a href="_sources/ADCP_Delft3D_TRTS_example.ipynb.txt" rel="nofollow"> View page source</a>
Expand Down Expand Up @@ -178,7 +127,7 @@ <h2>1. Preparing the ADCP Field Data<a class="headerlink" href="#1.-Preparing-th
<p>Acoustic Dopple Curent Profiler (ADCP) field data was collected in 2010 on the Tanana river near Nenana. From the picture shown below the flow can be seen enetering the picture from the bottom heading north. The figure further shows the two passes (Transects) of data collected. The data is collected using a barge used with a debris shield infront to protect instruments and test devices. The transect we are looking at are up-steam of the testing barge making them a good repesentiaion of the flow
field the Curent Energy Convertes (CEC) are operating in. This transect data was collected using a Teledyne Rio Grand ADCP monted at the Bow of the boat facing downward. The boat faced and moved perpendicular to the river flow across the river as the ADCP was recording.</p>
<p>In the next section we will import the two transects shown here into MHKiT and then interpolate these two passes into a single idealized transect for comparison with the simulated Deflt3D data.</p>
<p><img alt="86cea90e39a04a2e861b58e4c81d4645" class="no-scaled-link" src="data/river/ADCP_transect/TRTS_transect_map.png" style="width: 1080px; height: 920px;" /></p>
<p><img alt="ee9e8f6a7bf94e22a7432c1229766db3" class="no-scaled-link" src="data/river/ADCP_transect/TRTS_transect_map.png" style="width: 1080px; height: 920px;" /></p>
<section id="ADCP:-Importing-Data">
<h3>ADCP: Importing Data<a class="headerlink" href="#ADCP:-Importing-Data" title="Link to this heading"></a></h3>
<p>The MHKiT DOLfYN api module can import <code class="docutils literal notranslate"><span class="pre">.PDO</span></code> and other binary formats from ADCP and ADV to an xarray. For this analysis we import two transect passes stored in the ‘data’ folder in <code class="docutils literal notranslate"><span class="pre">.PDO</span></code> format. For comparison to the numerical model we want to average the two transects into one xarray (‘transect_1_2’).</p>
Expand Down Expand Up @@ -2109,10 +2058,7 @@ <h2>4. Discussion<a class="headerlink" href="#4.-Discussion" title="Link to this

</div>
</div>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="adcp_example.html" class="btn btn-neutral float-left" title="Analyzing ADCP Data with MHKiT" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="adv_example.html" class="btn btn-neutral float-right" title="Reading ADV Data with MHKiT" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>
<footer>

<hr/>

Expand Down
71 changes: 6 additions & 65 deletions docs/Delft3D_example.html
Original file line number Diff line number Diff line change
Expand Up @@ -25,9 +25,7 @@
<script defer="defer" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
<script src="_static/js/theme.js"></script>
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
<link rel="next" title="Tidal Power Performance Analysis" href="tidal_performance_example.html" />
<link rel="prev" title="MHKiT Metocean Data" href="metocean_example.html" />
<link rel="search" title="Search" href="search.html" />
</head>

<body class="wy-body-for-nav">
Expand All @@ -52,66 +50,13 @@
</form>
</div>
</div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
<ul class="current">
<ul>
<li class="toctree-l1"><a class="reference internal" href="overview.html">Overview</a></li>
<li class="toctree-l1"><a class="reference internal" href="installation.html">MHKiT-Python Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="matlab_installation.html">MHKiT-MATLAB Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="examples_overview.html">MHKiT Examples</a></li>
<li class="toctree-l1"><a class="reference internal" href="qc.html">QC Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="wave.html">Wave Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="river.html">River Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="tidal.html">Tidal Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="power.html">Power Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="loads.html">Loads Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="dolfyn.html">DOLfYN Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="mooring.html">Mooring Module</a></li>
<li class="toctree-l1"><a class="reference internal" href="utils.html">Utils Module</a></li>
<li class="toctree-l1 current"><a class="reference internal" href="python.html">MHKiT-Python</a><ul class="current">
<li class="toctree-l2"><a class="reference internal" href="python.html#installation">Installation</a></li>
<li class="toctree-l2"><a class="reference internal" href="python.html#api-documentation">API Documentation</a></li>
<li class="toctree-l2 current"><a class="reference internal" href="python.html#examples">Examples</a><ul class="current">
<li class="toctree-l3"><a class="reference internal" href="qc_example.html">MHKiT Quality Control Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="wave_example.html">MHKiT Wave Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="river_example.html">MHKiT River Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="tidal_example.html">MHKiT Tidal Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="power_example.html">MHKiT Power Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="loads_example.html">MHKiT Loads Module</a></li>
<li class="toctree-l3"><a class="reference internal" href="environmental_contours_example.html">MHKiT Environmental Contours</a></li>
<li class="toctree-l3"><a class="reference internal" href="wecsim_example.html">MHKiT WEC-Sim Example</a></li>
<li class="toctree-l3"><a class="reference internal" href="SWAN_example.html">MHKiT SWAN Example</a></li>
<li class="toctree-l3"><a class="reference internal" href="WPTO_hindcast_example.html">MHKiT WPTO Hindcast Example</a></li>
<li class="toctree-l3"><a class="reference internal" href="cdip_example.html">MHKiT CDIP IO</a></li>
<li class="toctree-l3"><a class="reference internal" href="PacWave_resource_characterization_example.html">PacWave Resource Assessment</a></li>
<li class="toctree-l3"><a class="reference internal" href="directional_waves.html">Directional Wave Spectrum from NDBC Buoys</a></li>
<li class="toctree-l3"><a class="reference internal" href="metocean_example.html">MHKiT Metocean Data</a></li>
<li class="toctree-l3"><a class="reference internal" href="metocean_example.html#1.-Request-Continuous-Wind-Data-from-NDBC">1. Request Continuous Wind Data from NDBC</a></li>
<li class="toctree-l3 current"><a class="current reference internal" href="#">Delft3D IO Module</a><ul>
<li class="toctree-l4"><a class="reference internal" href="#Loading-Data-from-Delft3D-as-a-NetCDF">Loading Data from Delft3D as a NetCDF</a></li>
<li class="toctree-l4"><a class="reference internal" href="#Seconds-Run-and-Time-Index">Seconds Run and Time Index</a></li>
<li class="toctree-l4"><a class="reference internal" href="#Dataframe-from-NetCDF">Dataframe from NetCDF</a></li>
<li class="toctree-l4"><a class="reference internal" href="#Plotting-a-Line-Plot-Between-Two-Points">Plotting a Line Plot Between Two Points</a></li>
<li class="toctree-l4"><a class="reference internal" href="#Contour-Plot-for-a-Given-Sigma-Layer">Contour Plot for a Given Sigma Layer</a></li>
<li class="toctree-l4"><a class="reference internal" href="#Plotting-a-Contour-Plot-of-a-given-Plane">Plotting a Contour Plot of a given Plane</a></li>
<li class="toctree-l4"><a class="reference internal" href="#Contour-Plot-of-Turbulent-Intensity">Contour Plot of Turbulent Intensity</a></li>
<li class="toctree-l4"><a class="reference internal" href="#Comparing-Face-Data-to-Cell-Data">Comparing Face Data to Cell Data</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="tidal_performance_example.html">Tidal Power Performance Analysis</a></li>
<li class="toctree-l3"><a class="reference internal" href="adcp_example.html">Analyzing ADCP Data with MHKiT</a></li>
<li class="toctree-l3"><a class="reference internal" href="ADCP_Delft3D_TRTS_example.html">Comparing Transect Data at the Tanana River Test Site</a></li>
<li class="toctree-l3"><a class="reference internal" href="adv_example.html">Reading ADV Data with MHKiT</a></li>
<li class="toctree-l3"><a class="reference internal" href="extreme_response_MLER_example.html">MLER example</a></li>
<li class="toctree-l3"><a class="reference internal" href="extreme_response_contour_example.html">Extreme Conditions Modeling - Contour Approach</a></li>
<li class="toctree-l3"><a class="reference internal" href="extreme_response_full_sea_state_example.html">Extreme Conditions Modeling - Full Sea State Approach</a></li>
<li class="toctree-l3"><a class="reference internal" href="short_term_extremes_example.html">MHKit Short-term Extreme Loads</a></li>
<li class="toctree-l3"><a class="reference internal" href="mooring_example.html">Mooring Module Example</a></li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="python.html#online-forum">Online Forum</a></li>
<li class="toctree-l2"><a class="reference internal" href="python.html#software-tests">Software Tests</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="matlab.html">MHKiT-MATLAB</a></li>
<li class="toctree-l1"><a class="reference internal" href="module.html">Module Overview</a></li>
<li class="toctree-l1"><a class="reference internal" href="examples.html">Examples</a></li>
<li class="toctree-l1"><a class="reference internal" href="api.html">API Documentation</a></li>
<li class="toctree-l1"><a class="reference internal" href="troubleshooting.html">Troubleshooting</a></li>
<li class="toctree-l1"><a class="reference internal" href="terminology.html">Terminology</a></li>
<li class="toctree-l1"><a class="reference internal" href="webinars.html">Webinars</a></li>
Expand All @@ -135,7 +80,6 @@
<div role="navigation" aria-label="Page navigation">
<ul class="wy-breadcrumbs">
<li><a href="index.html" class="icon icon-home" aria-label="Home"></a></li>
<li class="breadcrumb-item"><a href="python.html">MHKiT-Python</a></li>
<li class="breadcrumb-item active">Delft3D IO Module</li>
<li class="wy-breadcrumbs-aside">
<a href="_sources/Delft3D_example.ipynb.txt" rel="nofollow"> View page source</a>
Expand Down Expand Up @@ -1216,10 +1160,7 @@ <h2>Comparing Face Data to Cell Data<a class="headerlink" href="#Comparing-Face-

</div>
</div>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="metocean_example.html" class="btn btn-neutral float-left" title="MHKiT Metocean Data" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="tidal_performance_example.html" class="btn btn-neutral float-right" title="Tidal Power Performance Analysis" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>
<footer>

<hr/>

Expand Down
4 changes: 2 additions & 2 deletions docs/Delft3D_example.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -1319,7 +1319,7 @@
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
},
Expand All @@ -1333,7 +1333,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.8.8"
"version": "3.9.17"
}
},
"nbformat": 4,
Expand Down
Loading

0 comments on commit c8e8bea

Please sign in to comment.