GH Actions CI #189
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name: GH Actions CI | |
on: | |
push: | |
branches: | |
- master | |
pull_request: | |
branches: | |
- master | |
schedule: | |
# 3 am Tuesdays and Fridays | |
- cron: "0 3 * * 2,5" | |
concurrency: | |
group: "${{ github.ref }}-${{ github.head_ref }}-${{ github.workflow }}" | |
cancel-in-progress: true | |
defaults: | |
run: | |
shell: bash -l {0} | |
jobs: | |
unittests: | |
if: "github.repository == 'MDAnalysis/GridDataFormats'" | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest, ] | |
python-version: ["3.9", "3.10", "3.11", "3.12"] | |
include: | |
- os: windows-latest | |
python-version: "3.12" | |
- os: macos-latest | |
python-version: "3.12" | |
steps: | |
- uses: actions/checkout@v2 | |
- name: setup_miniconda | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
python-version: ${{ matrix.python-version }} | |
auto-update-conda: true | |
channel-priority: flexible | |
channels: conda-forge | |
add-pip-as-python-dependency: true | |
use-mamba: true | |
miniforge-variant: Mambaforge | |
- name: install package deps | |
run: | | |
mamba install numpy scipy mrcfile pytest pytest-cov codecov | |
- name: check install | |
run: | | |
which python | |
which pip | |
conda info | |
conda list | |
- name: install package | |
run: | | |
pip install -v . | |
- name: run unit tests | |
run: | | |
pytest -v --cov=gridData --cov-report=xml --color=yes ./gridData/tests | |
- name: codecov | |
uses: codecov/codecov-action@v3 | |
if: github.event_name != 'schedule' | |
with: | |
file: coverage.xml | |
fail_ci_if_error: True | |
verbose: True |