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GH Actions CI

GH Actions CI #189

Workflow file for this run

name: GH Actions CI
on:
push:
branches:
- master
pull_request:
branches:
- master
schedule:
# 3 am Tuesdays and Fridays
- cron: "0 3 * * 2,5"
concurrency:
group: "${{ github.ref }}-${{ github.head_ref }}-${{ github.workflow }}"
cancel-in-progress: true
defaults:
run:
shell: bash -l {0}
jobs:
unittests:
if: "github.repository == 'MDAnalysis/GridDataFormats'"
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, ]
python-version: ["3.9", "3.10", "3.11", "3.12"]
include:
- os: windows-latest
python-version: "3.12"
- os: macos-latest
python-version: "3.12"
steps:
- uses: actions/checkout@v2
- name: setup_miniconda
uses: conda-incubator/setup-miniconda@v2
with:
python-version: ${{ matrix.python-version }}
auto-update-conda: true
channel-priority: flexible
channels: conda-forge
add-pip-as-python-dependency: true
use-mamba: true
miniforge-variant: Mambaforge
- name: install package deps
run: |
mamba install numpy scipy mrcfile pytest pytest-cov codecov
- name: check install
run: |
which python
which pip
conda info
conda list
- name: install package
run: |
pip install -v .
- name: run unit tests
run: |
pytest -v --cov=gridData --cov-report=xml --color=yes ./gridData/tests
- name: codecov
uses: codecov/codecov-action@v3
if: github.event_name != 'schedule'
with:
file: coverage.xml
fail_ci_if_error: True
verbose: True