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Bump to miniforge and py3.13 (#139) #287

Bump to miniforge and py3.13 (#139)

Bump to miniforge and py3.13 (#139) #287

Workflow file for this run

name: GH Actions CI
on:
push:
branches:
- master
pull_request:
branches:
- master
schedule:
# 3 am Tuesdays and Fridays
- cron: "0 3 * * 2,5"
concurrency:
group: "${{ github.ref }}-${{ github.head_ref }}-${{ github.workflow }}"
cancel-in-progress: true
defaults:
run:
shell: bash -leo pipefail {0}
jobs:
unittests:
if: "github.repository == 'MDAnalysis/GridDataFormats'"
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, ]
python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
include:
- os: windows-latest
python-version: "3.13"
- os: macos-latest
python-version: "3.13"
steps:
- uses: actions/checkout@v4
- name: setup_micromamba
uses: mamba-org/setup-micromamba@v2
with:
environment-name: mda
create-args: >-
python=${{ matrix.python-version }}
pip
condarc: |
channels:
- conda-forge
- name: install package deps
run: |
micromamba install numpy scipy mrcfile pytest pytest-cov codecov
- name: check install
run: |
which python
which pip
micromamba info
micromamba list
- name: install package
run: |
pip install -v .
- name: run unit tests
run: |
pytest -v --cov=gridData --cov-report=xml --color=yes ./gridData/tests
- name: codecov
uses: codecov/codecov-action@v4
if: github.event_name != 'schedule'
with:
file: coverage.xml
fail_ci_if_error: True
verbose: True
token: ${{ secrets.CODECOV_TOKEN }}