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Fix/multiclass recall macro avg ignore index #2710

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@rittik9 rittik9 commented Sep 1, 2024

What does this PR do?

Fixes #2441

Details
  • Was this discussed/agreed via a Github issue? (no need for typos and docs improvements)
  • Did you read the contributor guideline, Pull Request section?
  • Did you make sure to update the docs?
  • Did you write any new necessary tests?

Did you have fun?

Yes

Issue:

  • The root of the problem seems to be that the ignore_index information is not being properly propagated to the final averaging step i.e. the _adjust_weights_safe_divide function doesn't know that which class should be ignored.

Solution:

  • To address this issue, I updated the code to ensure that the ignore_index information is preserved throughout the entire process, making sure it is correctly passed through all intermediate steps up to the final averaging stage i.e. _adjust_weights_safe_divide function .
  • Updated the _adjust_weights_safe_divide function to accept an additional ignore_index parameter, which is passed through the _precision_recall_reduce function, called in the compute method of the MulticlassRecall class. This change adjusts the weights in the _adjust_weights_safe_divide function, setting the weight of the ignored class to 0.

📚 Documentation preview 📚: https://torchmetrics--2710.org.readthedocs.build/en/2710/

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looks good, can we add also test for this case...

@rittik9 rittik9 marked this pull request as draft September 2, 2024 19:12
@rittik9 rittik9 marked this pull request as ready for review September 2, 2024 22:15
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rittik9 commented Sep 2, 2024

looks good, can we add also test for this case...

Sure

@rittik9 rittik9 requested a review from Borda September 4, 2024 11:26
Borda
Borda previously approved these changes Sep 4, 2024
@Borda Borda self-requested a review September 6, 2024 09:10
@Borda Borda dismissed their stale review September 6, 2024 09:10

pending on adding test

@Borda Borda added the bug / fix Something isn't working label Sep 6, 2024
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rittik9 commented Sep 6, 2024

@Borda What do I have to modify?

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Borda commented Sep 11, 2024

@rittik9 mind checking the changed docstest values and whether it is correct?

@JeroenMandersloot
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Any update on when this PR could be merged? It would really help if we could update from the 0.9.3 version once this fix is merged.

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Borda commented Oct 20, 2024

Any update on when this PR could be merged? It would really help if we could update from the 0.9.3 version once this fix is merged.

the tests/doctests need to be fixed, are you interested in submitting a suggestion on what else needs to be fixed/chnaged?

@Borda Borda requested a review from baskrahmer October 25, 2024 07:52
@Borda Borda enabled auto-merge (squash) October 31, 2024 11:58
@Borda Borda mentioned this pull request Oct 31, 2024
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@@ -661,6 +661,37 @@ def test_corner_case():
assert res == 1.0


def test_multiclass_recall_ignore_index():
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Seems we are already testing various ignore_index with reference metric so if we had it wrong this did not pass already... it is possible that we also have a bug in the reference metric?
cc: @SkafteNicki

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looking to the code and the ignore index is already applied in _multilabel_stat_scores_format which reduces the preds/target size the same way as the reference metric so calling it with null weights in fact ignores additional index

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The problem is we are using sklearn's recall_score as a reference for our unittests. So even if in _reference_sklearn_precision_recall_multiclass() function we are using remove_ignore_index function for removing those predictions whose real values are ignore_index class before passing it to recall_score function, it does not matter. Because whenever average='macro' sklearn's recall_score will always return mean cosidering the total no. of classes (as we are passing all the classes in recall_score() function's labels argument). That is the reason why unittests failed in the first place. I think we need to fix the unittests to take care of ignore_index using sklearn's recall_score() function's labels argument. I've prepared a notebook for explanation. cc:@Borda.

@rittik9 rittik9 marked this pull request as draft November 1, 2024 20:31
auto-merge was automatically disabled November 1, 2024 20:31

Pull request was converted to draft

@rittik9 rittik9 marked this pull request as ready for review November 2, 2024 00:05
@rittik9 rittik9 marked this pull request as draft November 2, 2024 00:16
@rittik9 rittik9 marked this pull request as ready for review November 2, 2024 00:47
@rittik9 rittik9 marked this pull request as draft November 2, 2024 01:22
@DimitrisMantas
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Just to chime in, I think this issue is present in pretty much all metrics that make use of _adjust_weights_safe_divide.

I see this PR fixes, some of them, but others, such as JaccardIndex are left as is.

… wrong answer when ignore_index is specified
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Incorrect result in computing MulticlassRecall macro average when ignore_index is specified
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