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Use argparse so it can be run from the terminal #1

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I just added a few lines to the end for convenience, although it won't be necessary in the final pipeline version. It might also be worth setting the permissions so it is executable when downloaded. I changed the shebang to python2.7 as my default is 3.5. Feel free to ignore these if you want to keep it streamlined! I just wanted to test it by typing something like ./loop3B.py --vis L12345.ms.

I just added a few lines to the end for convenience, although it won't be necessary in the final pipeline version. It might also be worth setting the permissions so it is executable when downloaded. I changed the shebang to python2.7 as my default is 3.5.
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