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Accept affinity and distance matrices

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@scottgigante scottgigante released this 01 Jun 00:06
· 484 commits to main since this release
ffb3c24

The Python version of PHATE now accepts both distance matrices and affinity matrices with the keyword knn_dist='precomputed'.

We assume distance matrices have only zeroes along the diagonal, and affinity matrices have no zeroes on the diagonal.