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Update a few things for v0.7 #460

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adambrewster
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I can't tell if my other PR is breaking things, so here's an attempt at updating what I can for the latest master branch of julia. These are mostly mechanical search and replace fixes based on error and warning messages. Only a couple are required for the tests to pass, but the others help with deprecation warnings. I tried to use the Compat package so I hope this won't break previous versions.

Let's see what travis says...

src/HDF5.jl Outdated
push!(row, reshape(val, size(dtype)))
elseif dtype<:HDF5BitsKind
push!(row, read(io, dtype))
else
# for other types, just store the raw bytes and let the user
# decide what to do
push!(row, read!(io, Vector{UInt8}(dsize)))
push!(row, read!(io, @compat Vector{UInt8}(uninitialized, dsize)))
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I don't think any of the modifications in this file require @compact, otherwise lgtm

src/HDF5.jl Outdated
@@ -1999,16 +2001,16 @@ for (jlname, h5name, outtype, argtypes, argsyms, msg) in
(:h5_open, :H5open, Herr, (), (), "Error initializing the HDF5 library"),
(:h5_set_free_list_limits, :H5set_free_list_limits, Herr, (Cint, Cint, Cint, Cint, Cint, Cint), (:reg_global_lim, :reg_list_lim, :arr_global_lim, :arr_list_lim, :blk_global_lim, :blk_list_lim), "Error setting limits on free lists"),
(:h5a_close, :H5Aclose, Herr, (Hid,), (:id,), "Error closing attribute"),
(:h5a_write, :H5Awrite, Herr, (Hid, Hid, Ptr{Void}), (:attr_hid, :mem_type_id, :buf), "Error writing attribute data"),
(:h5a_write, :H5Awrite, Herr, (Hid, Hid, Ptr{Nothing}), (:attr_hid, :mem_type_id, :buf), "Error writing attribute data"),
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Should this be Ptr{CVoid}?

@musm
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musm commented Mar 23, 2018

superseded by #468

@musm musm closed this Mar 23, 2018
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