08 Mar 14:48

v0.1 Pre-release

Pre-release

BioMartScript v0.1

Dependencies BridgeDb-release_2.3.1

build_db.sh

Run build_db.sh to build new mapping database and the QC
BioMartScript.jar & build_db.sh are expected to be in the same directory

./build_db.sh

Config

Change those variables to fit your environment

OLD_DB_PATH=~/BridgeDb/Databases/94/
NEW_DB_PATH=~/BridgeDb/Databases/95/

NEW_ENSEMBL_RELEASE=95

BRIDGEDB_PATH=~/BridgeDb/BridgeDb-release_2.3.1/
SPECIES_CONFIG_PATH=~/BridgeDb/Species_config/95/

Assets 4