Workflow sets default permissions #86
Workflow file for this run
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| name: Conda package | |
| on: push | |
| permissions: read-all | |
| env: | |
| PACKAGE_NAME: mkl_fft | |
| MODULE_NAME: mkl_fft | |
| TEST_ENV_NAME: test_mkl_fft | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python: ['3.10'] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set pkgs_dirs | |
| run: | | |
| echo "pkgs_dirs: [~/.conda/pkgs]" >> ~/.condarc | |
| - name: Cache conda packages | |
| uses: actions/cache@v3 | |
| env: | |
| CACHE_NUMBER: 0 # Increase to reset cache | |
| with: | |
| path: ~/.conda/pkgs | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}-${{hashFiles('**/meta.yaml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}- | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}- | |
| - name: Add conda to system path | |
| run: echo $CONDA/bin >> $GITHUB_PATH | |
| - name: Install conda-build | |
| run: conda install conda-build | |
| - name: Build conda package | |
| run: | | |
| CHANNELS="-c conda-forge -c intel --override-channels" | |
| VERSIONS="--python ${{ matrix.python }}" | |
| TEST="--no-test" | |
| conda build \ | |
| $TEST \ | |
| $VERSIONS \ | |
| $CHANNELS \ | |
| conda-recipe | |
| - name: Upload artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python }} | |
| path: /usr/share/miniconda/conda-bld/linux-64/${{ env.PACKAGE_NAME }}-*.tar.bz2 | |
| test: | |
| needs: build | |
| runs-on: ${{ matrix.runner }} | |
| strategy: | |
| matrix: | |
| python: ['3.10'] | |
| experimental: [false] | |
| runner: [ubuntu-latest] | |
| continue-on-error: ${{ matrix.experimental }} | |
| env: | |
| CHANNELS: -c intel -c main --override-channels | |
| steps: | |
| - name: Download artifact | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python }} | |
| - name: Add conda to system path | |
| run: echo $CONDA/bin >> $GITHUB_PATH | |
| - name: Install conda-build | |
| run: conda install conda-build | |
| - name: Create conda channel | |
| run: | | |
| mkdir -p $GITHUB_WORKSPACE/channel/linux-64 | |
| mv ${PACKAGE_NAME}-*.tar.bz2 $GITHUB_WORKSPACE/channel/linux-64 | |
| conda index $GITHUB_WORKSPACE/channel | |
| # Test channel | |
| conda search $PACKAGE_NAME -c $GITHUB_WORKSPACE/channel --override-channels | |
| - name: Collect dependencies | |
| run: | | |
| CHANNELS="-c $GITHUB_WORKSPACE/channel ${{ env.CHANNELS }}" | |
| conda create -n ${{ env.TEST_ENV_NAME }} $PACKAGE_NAME python=${{ matrix.python }} $CHANNELS --only-deps --dry-run > lockfile | |
| - name: Display lockfile | |
| run: cat lockfile | |
| - name: Set pkgs_dirs | |
| run: | | |
| echo "pkgs_dirs: [~/.conda/pkgs]" >> ~/.condarc | |
| - name: Cache conda packages | |
| uses: actions/cache@v3 | |
| env: | |
| CACHE_NUMBER: 0 # Increase to reset cache | |
| with: | |
| path: ~/.conda/pkgs | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}-${{hashFiles('lockfile') }} | |
| restore-keys: | | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}- | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}- | |
| - name: Install mkl_fft | |
| run: | | |
| CHANNELS="-c $GITHUB_WORKSPACE/channel ${{ env.CHANNELS }}" | |
| conda create -n ${{ env.TEST_ENV_NAME }} python=${{ matrix.python }} $PACKAGE_NAME pytest $CHANNELS | |
| # Test installed packages | |
| conda list -n ${{ env.TEST_ENV_NAME }} | |
| - name: Run tests | |
| run: | | |
| source $CONDA/etc/profile.d/conda.sh | |
| conda activate ${{ env.TEST_ENV_NAME }} | |
| pytest -v --pyargs $MODULE_NAME | |
| build_windows: | |
| runs-on: windows-latest | |
| strategy: | |
| matrix: | |
| python: ['3.10'] | |
| env: | |
| conda-bld: C:\Miniconda\conda-bld\win-64\ | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| auto-activate-base: true | |
| conda-build-version: "*" | |
| activate-environment: true | |
| python-version: ${{ matrix.python }} | |
| - name: Cache conda packages | |
| uses: actions/cache@v3 | |
| env: | |
| CACHE_NUMBER: 3 # Increase to reset cache | |
| with: | |
| path: /home/runner/conda_pkgs_dir | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}-${{hashFiles('**/meta.yaml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}- | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}- | |
| - name: Build conda package | |
| run: conda build --no-test --python ${{ matrix.python }} -c intel -c conda-forge --override-channels conda-recipe | |
| - name: Upload artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python }} | |
| path: ${{ env.conda-bld }}${{ env.PACKAGE_NAME }}-*.tar.bz2 | |
| test_windows: | |
| needs: build_windows | |
| runs-on: ${{ matrix.runner }} | |
| defaults: | |
| run: | |
| shell: cmd /C CALL {0} | |
| strategy: | |
| matrix: | |
| python: ['3.10'] | |
| experimental: [false] | |
| runner: [windows-latest] | |
| continue-on-error: ${{ matrix.experimental }} | |
| env: | |
| workdir: '${{ github.workspace }}' | |
| CHANNELS: -c intel -c conda-forge --override-channels | |
| steps: | |
| - name: Download artifact | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: ${{ env.PACKAGE_NAME }} ${{ runner.os }} Python ${{ matrix.python }} | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| auto-update-conda: true | |
| conda-build-version: '*' | |
| miniconda-version: 'latest' | |
| activate-environment: mkl_fft_test | |
| python-version: ${{ matrix.python }} | |
| - name: Create conda channel with the artifact bit | |
| shell: cmd /C CALL {0} | |
| run: | | |
| echo ${{ env.workdir }} | |
| mkdir ${{ env.workdir }}\channel\win-64 | |
| move ${{ env.PACKAGE_NAME }}-*.tar.bz2 ${{ env.workdir }}\channel\win-64 | |
| dir ${{ env.workdir }}\channel\win-64 | |
| - name: Index the channel | |
| shell: cmd /C CALL {0} | |
| run: conda index ${{ env.workdir }}\channel | |
| - name: Dump mkl_fft version info from created channel into ver.json | |
| shell: cmd /C CALL {0} | |
| run: | | |
| conda search ${{ env.PACKAGE_NAME }} -c ${{ env.workdir }}/channel --override-channels --info --json > ${{ env.workdir }}\ver.json | |
| - name: Output content of produced ver.json | |
| shell: pwsh | |
| run: Get-Content -Path ${{ env.workdir }}\ver.json | |
| - name: Collect dependencies | |
| shell: cmd /C CALL {0} | |
| run: | | |
| IF NOT EXIST ver.json ( | |
| copy /Y ${{ env.workdir }}\ver.json . | |
| ) | |
| SET "SCRIPT=%VER_SCRIPT1% %VER_SCRIPT2%" | |
| FOR /F "tokens=* USEBACKQ" %%F IN (`python -c "%SCRIPT%"`) DO ( | |
| SET PACKAGE_VERSION=%%F | |
| ) | |
| conda install -n mkl_fft_test ${{ env.PACKAGE_NAME }}=%PACKAGE_VERSION% python=${{ matrix.python }} -c ${{ env.workdir }}/channel ${{ env.CHANNELS }} --only-deps --dry-run > lockfile | |
| - name: Display lockfile content | |
| shell: pwsh | |
| run: Get-Content -Path .\lockfile | |
| - name: Cache conda packages | |
| uses: actions/cache@v3 | |
| env: | |
| CACHE_NUMBER: 0 # Increase to reset cache | |
| with: | |
| path: /home/runner/conda_pkgs_dir | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}-${{hashFiles('lockfile') }} | |
| restore-keys: | | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-python-${{ matrix.python }}- | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}- | |
| - name: Install mkl_fft | |
| shell: cmd /C CALL {0} | |
| run: | | |
| @ECHO ON | |
| IF NOT EXIST ver.json ( | |
| copy /Y ${{ env.workdir }}\ver.json . | |
| ) | |
| set "SCRIPT=%VER_SCRIPT1% %VER_SCRIPT2%" | |
| FOR /F "tokens=* USEBACKQ" %%F IN (`python -c "%SCRIPT%"`) DO ( | |
| SET PACKAGE_VERSION=%%F | |
| ) | |
| SET "TEST_DEPENDENCIES=pytest pytest-cov" | |
| conda install -n mkl_fft_test ${{ env.PACKAGE_NAME }}=%PACKAGE_VERSION% %TEST_DEPENDENCIES% python=${{ matrix.python }} -c ${{ env.workdir }}/channel ${{ env.CHANNELS }} | |
| - name: Report content of test environment | |
| shell: cmd /C CALL {0} | |
| run: | | |
| echo "Value of CONDA enviroment variable was: " %CONDA% | |
| echo "Value of CONDA_PREFIX enviroment variable was: " %CONDA_PREFIX% | |
| conda info && conda list -n mkl_fft_test | |
| - name: Run tests | |
| shell: cmd /C CALL {0} | |
| run: >- | |
| conda activate mkl_fft_test && python -m pytest -v -s --pyargs ${{ env.MODULE_NAME }} | |